Pairwise Alignments

Query, 387 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 358 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  117 bits (292), Expect = 7e-31
 Identities = 94/340 (27%), Positives = 148/340 (43%), Gaps = 50/340 (14%)

Query: 20  LALLILVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGGYCMA 79
           L +  L+  P  +D + L  +   L Y  V +GL+L  G+ G  S+G   F G G Y   
Sbjct: 27  LLVAFLLAAPWVIDEYWLAQLTFVLIYGIVGLGLMLLAGFTGQFSIGHAAFLGAGAYTQG 86

Query: 80  MFLKLEASDPESTKIQSTPGIPDFMDWNQITELPWLWQPFHSFSFTLAAVIAVPVLLAFI 139
           +   L              G+P                      F LA V A  +  A  
Sbjct: 87  VLTNL--------------GVP----------------------FPLALVAAAALSAAVG 110

Query: 140 IGMALFKRRVGDVYFSIVTQAIALILTVLIVGQQGLTGGVNGI-TDLKTLLGWDLRTDSA 198
           + +AL   RV  +Y  I T +   I+  +    + +TGG  G+      L GW L +   
Sbjct: 111 VVVALPALRVKGIYLGIATLSFGFIVEEVFARWESVTGGNAGLHVKSPQLFGWSLGSGEG 170

Query: 199 KMILYFINAGLLFGCIFIGRFILASKLGRLLMAMRDKEERVRFSGYDVASFKIFVFCVAA 258
              L  + A L    I     +L S  GR  +A+RD E   +  G  +A +K   F ++A
Sbjct: 171 FYFLCLVVAVLATLGIL---NLLRSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISA 227

Query: 259 AFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGAL-------LVN 311
           A + +GGA++A ++ F+SP    I+ SI++++   +GG  S+ GA  GA+       L++
Sbjct: 228 ALAGLGGALYAHKLSFISPDQFSILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLIS 287

Query: 312 YGKTYFSESF---PELWLYLMGGLFIAVVMYFPNGLAGLW 348
            GK +  E+    P L   + G + IA V++ P GL G W
Sbjct: 288 IGKDWLPEAIGQAPGLQGLVYGVVLIAFVLFEPLGLYGRW 327