Pairwise Alignments

Query, 387 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  127 bits (320), Expect = 4e-34
 Identities = 111/357 (31%), Positives = 167/357 (46%), Gaps = 45/357 (12%)

Query: 19  LLALLI--LVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGGY 76
           LL+L++  LV  PL L +  L    + L +A  A+   L  GY G+LS GQG+FFGVG Y
Sbjct: 17  LLSLVVASLVALPLLLPSATL--ATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAY 74

Query: 77  CMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPWLWQPFHSFSFTLAAVIAVPVLL 136
             A+ +                             L W       F+  L A +     L
Sbjct: 75  GAALLM---------------------------IHLQW-----GMFAALLGAAV-FGAFL 101

Query: 137 AFIIGMALFKRRVGDVYFSIVTQAIALILTVLIVGQQGLTGGVNGITDL---KTLLGWDL 193
           A ++G AL  RR G +YF ++T A + +   L     G TGG NG+ D+      +   +
Sbjct: 102 ALLVG-ALAIRRTG-IYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHV 159

Query: 194 RTDSAKMILYFINAGLLFGCIFIGRF-ILASKLGRLLMAMRDKEERVRFSGYDVASFKIF 252
             D A    +++   +LF  IF     ++ S  G  L+A+R+ E R    GYD   FKI 
Sbjct: 160 LVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKIL 219

Query: 253 VFCVAAAFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNY 312
           VF ++ A + I GA++A+ + F   S + ++ S  ++I   VGG  SL G++ GA  +  
Sbjct: 220 VFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVL 279

Query: 313 GKTYFSESFPELWLYLMGGLFIAVVMYFPNGLAGLWDSHGRQALA-KMLRRKPVAAT 368
                SE +P  WL L+G + I VV++   GL G     G++ LA +    KP A T
Sbjct: 280 LGDVLSELWPR-WLMLLGVILILVVVFMRGGLWGGLTELGKRLLATRNADDKPQAKT 335