Pairwise Alignments

Query, 305 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 294 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  128 bits (321), Expect = 2e-34
 Identities = 89/282 (31%), Positives = 143/282 (50%), Gaps = 25/282 (8%)

Query: 28  MALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTAHFAPGFQPYYFFFAIALSFLVA 87
           +ALGL++IFG + V+N AHG FL +  Y ++ C SL      G  PY        +  + 
Sbjct: 23  IALGLSLIFGVLRVVNFAHGSFLMLSLYLSFWCWSLL-----GMDPYLSALVTVPTMFL- 76

Query: 88  GAIGWLVEWAMISRLYKR-------PLDTLLATWGLSLVMQQTFRSVFG----AREVSAE 136
             +G+LV+  +IS L  R       PL  LL T G+ LV+       FG    + ++S  
Sbjct: 77  --LGYLVQRLIISPLIVRERALVVEPLSALLLTCGIFLVVDNLALMAFGPDVRSVQLSYY 134

Query: 137 PPAWLMGSVNFTDAIEIPRNGLFMMALTLLLTAAIFLMLYRSRWGLQVRATVQNRLMSRA 196
            P+ ++G +     ++ PR  L   A ++ +  A+   L  S  G  +RAT QNR  +  
Sbjct: 135 MPSVMLGPI----PVDTPR--LIAAASSIGVAVAVSAWLRYSHLGRAIRATAQNRDAAAM 188

Query: 197 VGINTRKVDRMTFALGCGVAGVAGAAFTTIGSTGPTAGSQYIVDTFLVVVFGGAQSLFGT 256
            GI+  +V  +TF LGC + G+ GA         P  G  + + +F+VVV GG  SL G+
Sbjct: 189 SGIDVPQVYAVTFGLGCAILGLFGALIAPFIPVNPQIGVAFGIKSFIVVVLGGMGSLPGS 248

Query: 257 IASAFVIAQTQSLSEFFLSGSMAKVLTLSSVILILMLRPQGL 298
           I    VI   ++++  F++ + A + +L   IL+L++RP G+
Sbjct: 249 IIGGLVIGVFEAVASQFVTATSAAIFSLGLFILVLLVRPAGI 290