Pairwise Alignments

Query, 305 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  142 bits (357), Expect = 1e-38
 Identities = 90/287 (31%), Positives = 148/287 (51%), Gaps = 12/287 (4%)

Query: 14  QGFNGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTAHFAPGFQP 73
           Q  NGL +  +  L+A+GL IIFG +  +N AHG F  +GAY  Y   ++T +F      
Sbjct: 8   QLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF------ 61

Query: 74  YYFFFAIALSFLVAGAIGWLVEWAMISRLYKRPLD-TLLATWGLSLVMQQTFRSVFGARE 132
              + A+ ++ LV  A+ W VE  +I R+Y  P    +L T G++L++Q+    ++G   
Sbjct: 62  ---WLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVG 118

Query: 133 VSAEPPAWLMGSVNFTDAIEIPRNGLFMMALTLLLTAAIFLMLYRSRWGLQVRATVQNRL 192
            +   P  L G +   D I  P   LF++    L+   ++L+L R+R+G  VRA  ++  
Sbjct: 119 KNIAVPPELRGVLILGDFI-YPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTE 177

Query: 193 MSRAVGINTRKVDRMTFALGCGVAGVAGAAFTTIGSTGPTAGSQYIVDTFLVVVFGGAQS 252
               +G N  ++  +TFALG G+AGVAG  F  +    P  G + +   F+VVV GG  S
Sbjct: 178 TVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGS 237

Query: 253 LFGTIASAFVIAQTQSLSEFFLSGSMAKVLTLSSVILILMLRPQGLF 299
             G +    ++   QS+    L    A ++   ++  ++++RP GLF
Sbjct: 238 FGGALVGGLLVGVVQSMMT-SLWPQGASLMIYGAMAAVILVRPYGLF 283