Pairwise Alignments

Query, 412 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

 Score =  280 bits (717), Expect = 4e-80
 Identities = 164/393 (41%), Positives = 232/393 (59%), Gaps = 19/393 (4%)

Query: 25  SLLAAALFSQGVLADNEGLAVTPTE-VTVGQLHSATGTMAISETGSIQAERLAIEQINAS 83
           SL+ A   S  + A     ++   E + VG LHS +GTMAISET       + IEQINA 
Sbjct: 5   SLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAK 64

Query: 84  GGILGRQIKVIQEDGASDWPTFAEKAKKLLVNDKVAAVFGCWTSASRKAVLPIFEKENGL 143
           GG+ G+ ++ +  D AS+WP FAEK+++LL  DKVA VFGCWTS SRK+VLP+FE+ NGL
Sbjct: 65  GGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGL 124

Query: 144 LYYPTFYEGLEQSKNVIYTGQEATQQILASLDWIAKTKG--AKTFYLVGSDYIWPRTSMK 201
           L+YP  YEG E S NV YTG    QQ + +++++    G  AK F+L+G+DY++PRT+ K
Sbjct: 125 LFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNK 184

Query: 202 IARKHIENV-LHGTVVGEDYYPLGNTQFGSLINKVK---LKKPDVVFAAVVGGSNVAFYK 257
           I R  + +  +    + E Y P G+  + +++  +K         V + V G SNV FYK
Sbjct: 185 ILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYK 244

Query: 258 QLNAAGVNSAKQTLLTLSVTEDELLGIGGENMAGFYASMKYFQSLDNPNNKAFVEAFKAK 317
           +L   G+ +    ++  SV E+EL GI  + + G  A+  YF+S+DNP N+ FV  +KA 
Sbjct: 245 ELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKA- 303

Query: 318 YGK--------DAVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGY 369
           Y K         AV  D  +A Y+G  +W  AVEKA S DVDKV  A  G   + AP G+
Sbjct: 304 YAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFE-APSGF 362

Query: 370 VKIHE--NHHLWSKSRIGEVQPNGQFKVIYESD 400
               +  NHHL     IGE+Q +GQF V++E++
Sbjct: 363 TLTMDKTNHHLHKPVMIGEIQDDGQFSVVWETE 395