Pairwise Alignments

Query, 412 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 92/390 (23%), Positives = 144/390 (36%), Gaps = 36/390 (9%)

Query: 30  ALFSQGVLADNEGLAVTPTEVTVGQLHSATGTMAISETGSIQAERLAIEQINASGGILGR 89
           AL + G L      A     +T   L S +G  A     +    RLAI +      +LG 
Sbjct: 12  ALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIAE---HPQLLGH 68

Query: 90  QIKVIQEDGASDWPTFAEKAKKLLVNDKVAAVFGCWTSASRKAVLPIFEKENGLLYYPTF 149
            +K    D   +      K ++ +  D      GC  S+S  AV     K  G+   P  
Sbjct: 69  PLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPVG 128

Query: 150 YEGLEQSKNVIYTGQEATQQILASLDWIAKTKGA---------------KTFYLVGSDYI 194
            + +        TG++      ++  W   T GA               K +Y +   Y+
Sbjct: 129 ADEI--------TGKDCNA---STFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYV 177

Query: 195 WPRTSMKIARKHIENVLHGTVVGEDYYPLGNTQFGSLINKVKLKKPDVVFAAVVGGSNVA 254
           +    +  ARK     L    +G  Y+ L   +F   +      KPDV+     G     
Sbjct: 178 FGDALLDNARKVFAE-LGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASN 236

Query: 255 FYKQLNAAGVNSAKQTLLTLSVTEDELLGIGGENMAGFYASMKYFQSLDNPNNKAFVEAF 314
             +Q    G+    + L+  S   D+   +G + + G Y   +Y+  +D P NK  V A 
Sbjct: 237 ALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAAT 296

Query: 315 KAKYGKDAVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKIHE 374
           +  YG +        A Y+G  +   A+ KAGS D   V AA  G+  +  P G   I  
Sbjct: 297 RKAYGINP--NYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQ-GPTGEELIRP 353

Query: 375 -NHHLWSKSRIGEVQPNGQFKVIYESDLIE 403
            +H +     +   +P GQ +   E DL E
Sbjct: 354 GDHQVLKDYYLLRGKPQGQMR--DEDDLAE 381