Pairwise Alignments

Query, 1127 a.a., ATPase from Pseudomonas simiae WCS417

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  196 bits (499), Expect = 8e-54
 Identities = 133/401 (33%), Positives = 216/401 (53%), Gaps = 28/401 (6%)

Query: 648  LLLMQEIDAHSLTDQALQQAKEASEAANAAKSRYVTGLSHELRTPLNSILGFTQILQRDS 707
            ++L Q+I    L  + L++AK  +E A+ AKS ++  +SHE+RTPLN ++GFT ++ +  
Sbjct: 662  MMLTQDITESCLQREELKKAKILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLVLKTD 721

Query: 708  AMPEQHQDALATILRSGSHLVSLIDGLLDVAKIEAGKLRLELTEIPFPELLHDLEQMFTP 767
                Q Q  L+ + +SG+ L+++I+ +LD +KIEAGKL L++      EL      + T 
Sbjct: 722  LSETQAQ-YLSIVNQSGNALLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITY 780

Query: 768  QAHDKGLRFRLDCVGKIPAVVRGDEKRVRQILINLLGNAVNFTDSGEVRLRV-------S 820
            + H KGL   L+    IP  +  D  RV+QI++NLLGNA  FT+ GE+ L++       +
Sbjct: 781  EVHKKGLEMLLNIHPDIPRFIWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEA 840

Query: 821  YMRETANFEIIDTGIGIDPGQLERIFQPFERGDL--MRQDNGVGLGLTITRMLTALMGGE 878
                   F + DTGIGI   +  +IF+ F + D+   ++  G GLGLTI+  L  LM   
Sbjct: 841  SREMVIRFSVRDTGIGIKAEKQTKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMHSG 900

Query: 879  LRVTSELDKGTCFQVRLFLSQVRAPQAVVHVEHDIIGYQGERRRILVVDDHVDHRKVLSG 938
            L++ S + KG+ F   L +      +  + +E D+         +L+VDD+ ++R ++  
Sbjct: 901  LQLHSTVGKGSTFYFDLNVKYEYGER--ITLEEDL-----SVENVLIVDDNDNNRMIIER 953

Query: 939  MLTPLGFEVIQASNGQDAIRQ-VALLAPDLILMDLSMPTLDGYETSRLIRRNALCTAPII 997
            M+   G    QA NG +AI++ V     D++LMD  MP ++G ET R I R  +   PII
Sbjct: 954  MMALRGISTSQAKNGFEAIQKFVEGEKFDVVLMDYHMPYMNGIETIRKI-REIVDRQPII 1012

Query: 998  VISANAFTDDRERSIAAACNDY-----LAKPVRTPELLGRL 1033
             + +++  D     I  AC +      L KP++  E+   L
Sbjct: 1013 FLHSSSDDD----KILKACKELGVRKKLVKPIKLQEMYDAL 1049



 Score = 56.2 bits (134), Expect = 2e-11
 Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 11/109 (10%)

Query: 922  RILVVDDHVDHRKVLSGMLTPLG--FEVIQASNGQDAIRQVALLAPDLILMDLSMPTLDG 979
            ++L+V+D+  +  +   ++  L     +++A+NG++A+  +    P +I MD+ MP ++G
Sbjct: 1078 KVLIVEDNTINMLLAKTVIHNLSPATAILEAANGKEALEVMKDELPSVIFMDVQMPEMNG 1137

Query: 980  YETSRLIRR-----NALCTAPIIVISANAFTDDRERSIAAACNDYLAKP 1023
            YE ++ IR+     N L    II ++A     +RE+ + A  ND++AKP
Sbjct: 1138 YEATQAIRKKYNKHNIL----IIALTAGNIKGEREKCMQAGMNDFIAKP 1182