Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 285 a.a., Putrescine transport system permease protein PotH from Xanthobacter sp. DMC5

 Score =  182 bits (463), Expect = 6e-51
 Identities = 94/274 (34%), Positives = 156/274 (56%), Gaps = 11/274 (4%)

Query: 3   RGYLLSLPALVLFAGLLILPLGLTLVLSFNVFDYQVGVKADEWTFAHYLSLLSDSYFYEI 62
           R + L+LP    FA   I PLGL + +SF       G          Y + LSD     +
Sbjct: 10  RDWALTLPLAAFFALFFIAPLGLLVAISFETERQMTGTLG----LGQYAAFLSDGLNLAV 65

Query: 63  FWRTFWISALVTLLCVLIGVPEAYILSRMGTPWRSIFLILILTPLLISVVVRAFGWSLLL 122
              T  + A  TLLC+L G P A++ +++   W+++ + L++ P++ SVVVR F W ++L
Sbjct: 66  LRDTLLVGAKATLLCLLFGYPLAWLCTKVSARWQAVLIFLVVLPIVTSVVVRTFAWIVIL 125

Query: 123 GADGLVNQVIQFLG--GRPVKLLYTPFAVIIALVHVMLPFMIIPVWTSLQKLDPSAEQAA 180
           G  G+VN+ I  LG   +P+KLL++   V+I L  V +P M++P+ T+LQ++DP+ E A+
Sbjct: 126 GRHGIVNEAILALGLSAQPLKLLFSETGVVIVLAQVQMPLMVLPLITTLQRIDPNLESAS 185

Query: 181 LSLGASQATVMRKIVLPQVMPGVLSGTLIVFGLAASSFAIPGLLGGRRLKMVATVVYDQY 240
            +LGA       K+ LP  +PG+++GT++ +    ++F    L+GG RL  +  +++ Q 
Sbjct: 186 QALGAGAWRTFFKVTLPLSLPGIIAGTILTYTACVTAFVTQSLIGGSRLLFMPMMIFQQA 245

Query: 241 LSELNWPMGATIAV-----VLLLVNLLIMLSWNR 269
           +   NWP  A ++V     VLL+V +L+ LS +R
Sbjct: 246 MDLQNWPFAAAVSVIFMVSVLLIVAMLVALSRSR 279