Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 290 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  149 bits (377), Expect = 5e-41
 Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 12/261 (4%)

Query: 6   LLSLPALVLFAGLLILPLGLTLVLSFNVFDYQVGVKAD-EWTFAHYLSLLSDSYFYEIFW 64
           LL  P+L +   LLI+PL   +  S         V+ D  +T AHY    SD+ ++  F 
Sbjct: 22  LLLAPSLAVVGCLLIVPLCWLVWQS---------VRQDGAFTLAHYARFFSDAVYWTTFL 72

Query: 65  RTFWISALVTLLCVLIGVPEAYILSRMGTPWRSIFLILILTPLLISVVVRAFGWSLLLGA 124
           +TF I+ +VT + VL+G P AY+ +     W    L +++ P   SV+VRA+ W +LL  
Sbjct: 73  QTFRIAFIVTAVTVLLGYPIAYVAAGASRRWSIFILAMVILPFWTSVLVRAYAWLILLQR 132

Query: 125 DGLVNQVIQFLG--GRPVKLLYTPFAVIIALVHVMLPFMIIPVWTSLQKLDPSAEQAALS 182
            GLVN V+   G    P+ L+      +IA VH++LPFM++P++ ++QK+      A  S
Sbjct: 133 RGLVNSVLTDFGLIQNPLALVNNELGTVIATVHILLPFMVLPLYATMQKIPAELTMAGAS 192

Query: 183 LGASQATVMRKIVLPQVMPGVLSGTLIVFGLAASSFAIPGLLGGRRLKMVATVVYDQYLS 242
           LG +   V  ++ LP  +PGV++G ++VF L    +  P LLGG R  MV+ +V      
Sbjct: 193 LGGTPFYVFTRVFLPLSLPGVVAGMVLVFVLTLGFYITPELLGGGRTYMVSMLVSRNIEV 252

Query: 243 ELNWPMGATIAVVLLLVNLLI 263
              W   ++I++VLL    L+
Sbjct: 253 YNEWGAASSISIVLLACVFLV 273