Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 306 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  142 bits (357), Expect = 1e-38
 Identities = 82/280 (29%), Positives = 150/280 (53%), Gaps = 14/280 (5%)

Query: 3   RGYLLSLPALVLFAGLLILPLGLTLVLSFNVFDYQVGVKADEWTFA-----------HYL 51
           R  ++ +P L LF    +LP  + L +SF   D  +    + +TF            +Y 
Sbjct: 18  RHAVIGIPFLWLFL-FFMLPFFIVLKISFAEADVAIPPYTEIYTFVEQKLQLVLNLGNYA 76

Query: 52  SLLSDSYFYEIFWRTFWISALVTLLCVLIGVPEAYILSRMGTPWRSIFLILILTPLLISV 111
            L  D  +   +  +  ++   TLLC+LIG P AY ++      +++ ++LI+ P   ++
Sbjct: 77  MLGDDELYIAAYLGSLKMAFFSTLLCLLIGYPMAYAIASARKEMQTVLVLLIMMPTWTAI 136

Query: 112 VVRAFGWSLLLGADGLVNQVIQFLG--GRPVKLLYTPFAVIIALVHVMLPFMIIPVWTSL 169
           ++R + W  +L  +GL+N  +  +G    P+++L T  AV I +V+  LPFMI+P++ +L
Sbjct: 137 LIRVYAWMGILSNNGLLNGFLMSMGLINEPLQILNTNIAVYIGVVYSYLPFMILPLYANL 196

Query: 170 QKLDPSAEQAALSLGASQATVMRKIVLPQVMPGVLSGTLIVFGLAASSFAIPGLLGGRRL 229
            K D S  +AA  LG+S      KI +P    G+++G ++VF      F IP LLGG   
Sbjct: 197 VKHDQSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPET 256

Query: 230 KMVATVVYDQYLSELNWPMGATIAVVLLLVNLLIMLSWNR 269
            M+  V++ ++ +  +WP+ + +AVV+L + ++ ++ +NR
Sbjct: 257 LMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPIILFNR 296