Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 316 a.a., putrescine ABC transporter permease PotH from Magnetospirillum magneticum AMB-1

 Score =  143 bits (361), Expect = 4e-39
 Identities = 80/255 (31%), Positives = 139/255 (54%), Gaps = 13/255 (5%)

Query: 18  LLILPLGLTLVLSFNVFDYQVGVK-----------ADEWTFAHYLSLLSDSYFYEIFWRT 66
           LL   +   +VL  ++ + Q+G+            A + T A Y +LL D+ +   +  +
Sbjct: 42  LLFFLVPFLIVLKISLSEPQMGIPPYMPLIDWAEGAFKGTLAGYNTLLGDNLYLLAYLGS 101

Query: 67  FWISALVTLLCVLIGVPEAYILSRMGTPWRSIFLILILTPLLISVVVRAFGWSLLLGADG 126
             ++ + TL C+L+G P AY ++R     R   L+L+  P   S ++R + W  +L  +G
Sbjct: 102 LKLAGISTLGCLLLGYPAAYAIARAPQSRRQALLMLVALPFWTSFLIRVYAWIGILKNEG 161

Query: 127 LVNQVIQFLG--GRPVKLLYTPFAVIIALVHVMLPFMIIPVWTSLQKLDPSAEQAALSLG 184
           L+N  +Q LG    P+++L T  AV+I +V+  LPFMI+P++ +L+K+D S  +AA  LG
Sbjct: 162 LLNMALQALGLISEPLQILETSTAVVIGMVYSYLPFMILPLYATLEKMDLSLLEAAADLG 221

Query: 185 ASQATVMRKIVLPQVMPGVLSGTLIVFGLAASSFAIPGLLGGRRLKMVATVVYDQYLSEL 244
                    + LP  MPGV++G ++VF  A   F IP LLGG    ++  V++ ++    
Sbjct: 222 CRPFKAFLAVTLPLSMPGVIAGCMLVFIPAVGEFVIPDLLGGPDTLVIGKVLWAEFFDNR 281

Query: 245 NWPMGATIAVVLLLV 259
           +WP  + +AV +L++
Sbjct: 282 DWPTASAVAVAMLVL 296