Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., putrescine ABC transporter permease PotH from Dickeya dianthicola ME23

 Score =  148 bits (374), Expect = 1e-40
 Identities = 81/278 (29%), Positives = 156/278 (56%), Gaps = 15/278 (5%)

Query: 3   RGYLLSLPALVLFAGLLILPLGLTLVLSFNVFDYQVGVKAD--EWT---------FAHYL 51
           R  +++LP L L   L +LP  +   +SF      V    D  EW            +YL
Sbjct: 31  RKLVIALPYLWLLC-LFMLPFLIVFKISFAEMARTVPPYTDLLEWAENRLQISLNIGNYL 89

Query: 52  SLLSDSYFYEIFWRTFWISALVTLLCVLIGVPEAYILSRMGTPWRSIFLILILTPLLISV 111
            LLSD  + + + ++  ++A+ TL C+++G P A+ ++      R+I L+L++ P   S 
Sbjct: 90  QLLSDPLYIDAYLQSLQVAAISTLCCLVVGYPMAWAVAHSKPSTRNILLLLVILPSWTSF 149

Query: 112 VVRAFGWSLLLGADGLVNQVIQFLG--GRPVKLLYTPFAVIIALVHVMLPFMIIPVWTSL 169
           ++R + W  +L  +G++N  + +LG   +P+ +L+T  AV I +V+  LPFM++P++T+L
Sbjct: 150 LIRVYAWMGILKDNGILNNFLLWLGVIDQPLVILHTNLAVYIGVVYSYLPFMVLPIYTAL 209

Query: 170 QKLDPSAEQAALSLGASQATVMRKIVLPQVMPGVLSGTLIVFGLAASSFAIPGLLGGRRL 229
            +LD S  +A+L LGA        +++P    G+++G+++VF      + IP LLGG   
Sbjct: 210 TRLDYSLVEASLDLGARPVRTFFSVIVPLTKGGIIAGSMLVFIPTVGEYVIPELLGGPDS 269

Query: 230 KMVATVVYDQYLSELNWPMGATIAVVLLLVNLLIMLSW 267
            M+  +++ ++ +  +WP+ + +A+V+L + L++ + W
Sbjct: 270 IMIGRILWQEFFNNRDWPVASAVAMVMLFL-LIVPIVW 306