Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  187 bits (475), Expect = 2e-52
 Identities = 98/251 (39%), Positives = 147/251 (58%)

Query: 14  VVVLFMMAPLVVVCLVAFTPENTLSLPTSGFSLRWFRAVFERADFIQAFYNSLILAFTAA 73
           +VV F++ P VVV + AF     LS P   +S RWF   F   DF + F N LI+   A+
Sbjct: 28  LVVAFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRDFSEGFRNGLIITAFAS 87

Query: 74  TLATLIAVPAALAISRYTFPGRNFFSALFLSPIIIPHLVLGVAMLRLFALMGVNGSFTWL 133
           ++A ++    A A+ RY+F G+    A+  SP++IPH  +G+  L L A +    +F  +
Sbjct: 88  SIALVVGAGFAFALDRYSFRGKMALEAVLTSPLVIPHFTIGLGFLILAAQIHATRTFALV 147

Query: 134 MLAHVVIITPYVLRLVLAAAIGIDRSAEQAAESLGASRFTLFRQITLPMILPGVAGGWLL 193
           ++ HVV++ P+V+R V  +   +D   E AA SLGA        +TLP+++PG+  GWL 
Sbjct: 148 IVCHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVTLPLLIPGLFSGWLF 207

Query: 194 AFINSFDEVTLSIFVSSPATQTLPVRMYVYATESIDPMMAAVSALVIALTAATMILLDRV 253
           A I SF+E T S+FV++ ATQTLPV MY Y  E  DP +AA+S + I +TA  + + +  
Sbjct: 208 AAILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIYIVVTALVLTIANAF 267

Query: 254 YGLDRVLVGKH 264
            GL +VL  +H
Sbjct: 268 LGLGKVLNVEH 278