Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 348 a.a., putative protein from Xanthobacter sp. DMC5

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 15/342 (4%)

Query: 7   LSCLSLALLASTAHAAPTLYLGMNGGTMERVYADKVLPAFEKAN-NVNVVIVP-GTSSDI 64
           L  L+  L+A  A A   L +    G  +  Y   VL  F KA+ ++ V   P  +S+ +
Sbjct: 10  LCLLAAGLMAGPAAAETNLTVMAYSGLFQERYTKAVLEPFMKAHPDIKVTFFPLPSSAAM 69

Query: 65  LAKVQANKDNPQMHVMFLDDGIMYRAIAMGLCDKLAPS--PTLEQIPAKAKIKEEA-VAV 121
           L  ++A K  PQ  V+ +D  +       GL  K+  +  P ++ +   A+I   A V V
Sbjct: 70  LGNLRAQKAAPQADVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDLYPNARIPSVAGVGV 129

Query: 122 TLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKDKVVFQSLASSTFGLHGFLMFNRIQG 181
           T     L YNA+  KE    AP SWM++A   +K KVV   +     GL   L+ N+  G
Sbjct: 130 TFDNLVLLYNAEQVKE----APKSWMEMAKAPYKGKVVIPGVPDIQ-GLGLVLILNKANG 184

Query: 182 GDE--TNVDPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVATQKLLGV 239
           G +   +VD G  A  + + PNV  +       + ++    A             +  G 
Sbjct: 185 GTDYLASVDKGLAAVAE-IAPNVQTWEPKPEVYAPIITGQAALGVGYNARAQVNSEQSGG 243

Query: 240 PMEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAFLLTAEAQAPALEEGDQIPSNPTTP 299
            ++   P+EG +       ++A     E A+    + L+ EAQ    E     P+N    
Sbjct: 244 KIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQKSFTETMFYAPTNSKAE 303

Query: 300 TTDKTRARVEAMQGYLQTAISIDWDQVNQARPEWNARWSRSI 341
            T     R       L   +++DW  + Q R +   +W R +
Sbjct: 304 ITGAALDRTAVKN--LDKVMAVDWIALAQVRDKIAEQWRRRV 343