Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 334 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 52/265 (19%)

Query: 43  LPAFEKANNVNVVIVPGTSSDILAKVQANKDNPQMHVMFLDDGIMYRAIAMGLCDKLAPS 102
           L A   +  V V +    S   LA++ A K  P   V++       +A    + D   P 
Sbjct: 42  LQAIAASTGVQVPLDNKNSGQSLAQLVAEKAAPVADVVYYGVTFGLQAQKAEVVDTYKPK 101

Query: 103 PTLEQIPAKAKIKEEA---VAVTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKDKVV 159
              +QIPA   +K+ A    A+  G  G+  N       G   P SW DL  P +K  V 
Sbjct: 102 -AWDQIPAG--LKDPAGHWFAIHSGTLGIMVNVDALG--GLPVPHSWADLLKPEYKGMVG 156

Query: 160 FQSLASSTFGLHGFLMFNRIQGGDETNVDPGFKAWPKTVGPNVLEYIASSAKISEMVQTD 219
           +   +S+  G    +  NR  GGD  N  P             ++Y    AK +      
Sbjct: 157 YLDPSSAFVGYVSAVAINRAMGGDLDNFAP------------AIDYFQKLAKNT------ 198

Query: 220 EAAIFPLTPTQVATQKLLG---------------------VPMEYAQPKEGAVVLNVAEC 258
                P+ P Q A  ++L                        + +  P+EG++ +     
Sbjct: 199 -----PIVPKQTAYARVLSGELPILVDYDFNAYRARYKDKANVAFVIPEEGSISVPYVMS 253

Query: 259 VIARNDQPELAQKLAAFLLTAEAQA 283
           ++A       AQK+  F+L+ E QA
Sbjct: 254 LVANAPHRANAQKVLDFVLSDEGQA 278