Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 338 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 46.6 bits (109), Expect = 9e-10
 Identities = 45/222 (20%), Positives = 80/222 (36%), Gaps = 4/222 (1%)

Query: 61  SSDILAKVQANKDNPQMHVMFLDDGIMYRAIAMGLCDKLAPSPTLEQIPAKAKIKEEAVA 120
           S   +A + A KD P   V +L   +  +A A G+     P+   +             A
Sbjct: 64  SGQAMAAMLAEKDKPVADVAYLGGPVGIQAKAAGVVTPYKPAGWTDIPDGMKDADGNWFA 123

Query: 121 VTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKDKVVFQSLASSTFGLHGFLMFNRIQ 180
           +  G  G   N++    K    P SW DL  P +   V +    S+  G  G +  N   
Sbjct: 124 IHSGTLGFFVNSEALGGK--PVPQSWADLLKPDYSGMVGYLDPTSAAVGYVGAVAVNLAL 181

Query: 181 GGDETNVDPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVATQKLLGVP 240
           GGD  + D     W K +  N    +      + ++  +   +          +     P
Sbjct: 182 GGDYGSFDKAV-GWFKDLQKN-QPIVPKQTSYARVLSGEIPILIDYDFNAYRAKYTDKAP 239

Query: 241 MEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAFLLTAEAQ 282
           + +  P EG V +     ++     PE  +K+  ++L+ + Q
Sbjct: 240 VAFVIPTEGTVSVPYVMALVKNGPNPENGKKVLDYVLSDKGQ 281