Pairwise Alignments

Query, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  164 bits (416), Expect = 1e-45
 Identities = 99/248 (39%), Positives = 143/248 (57%), Gaps = 4/248 (1%)

Query: 8   DLSDHAVPVQPLARTYPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLP 67
           D  D    +  L R    G Y  PH+H  GQLLYA+SGVM          +PP+RA+W+P
Sbjct: 23  DYQDVPRVLMALVRNQAAGAYNAPHTHRHGQLLYAVSGVMRAVAQGSLWFLPPKRALWIP 82

Query: 68  PGVAHGIRVVSDLQMRNIYLRPALAATLDSQVQVIEVGGLLRELIVTLVEEGDSGEAAYY 127
               H   +++ +QMR+IY++   AA    + ++++V  LLRELI+ L  E    E    
Sbjct: 83  AEEEHDQLMLTPVQMRSIYIQADAAAGFGDRCRIVDVSLLLRELILVLANEPIEYELEGR 142

Query: 128 DA-VVSLALLELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHHAETAGASV 186
           ++ VV+L L EL  AR   ++I  P  VDRRL+  C+AI+ AP      E+ A+  GAS 
Sbjct: 143 NSHVVALILSELAAARTLPLQIPWP--VDRRLLVVCRAILEAPGQTHRVEYWADQVGASS 200

Query: 187 RTLSRLFQNNLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGY-SPSSFSDMFRREL 245
           RTL RLF    G+ + +W +QV+LA A+  L  G+ +  IA+ LGY S S+FS MFRR +
Sbjct: 201 RTLIRLFLKETGLTYRQWVQQVRLACALERLENGEPIGRIAQDLGYVSASAFSAMFRRAI 260

Query: 246 GVAPSHYV 253
           GV+P  ++
Sbjct: 261 GVSPRDFL 268