Pairwise Alignments

Query, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 277 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  127 bits (320), Expect = 2e-34
 Identities = 80/223 (35%), Positives = 117/223 (52%), Gaps = 4/223 (1%)

Query: 32  HSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPPGVAHGIRVVSDLQMRNIYLRPAL 91
           H H  GQ+    SG++ V T   + ++PP RA WLPPG  H + +        + + PA 
Sbjct: 50  HRHLRGQVFCVESGLVHVRTAHGSWLLPPHRAGWLPPGELHKVGISGATSGWTVLIAPAA 109

Query: 92  AATLDSQVQVIEVGGLLRELIVTLVEEGDSGEA-AYYDAVVSLALLELQRARRSQIRIAM 150
           AA L  +  VI +  L+R L+   V  G      A  + + ++ L E++RA    + + M
Sbjct: 110 AAQLPERPCVIGISELMRALVRRAVTWGGHDTLDAEQERMAAVLLDEMRRAPHEPLHLPM 169

Query: 151 PVGVDRRLITACQAIMAAPSLEVAFEHHAETAGASVRTLSRLFQNNLGMGFAEWRRQVQL 210
           P   DRRL+    AI   P      +  A  AG S RTLSRLF     + FA+WR+Q +L
Sbjct: 170 PT--DRRLLRIATAIYEQPENNRTLDEWAHWAGLSPRTLSRLFLAETAVSFAKWRQQARL 227

Query: 211 ATAVAELIQGQSVSAIARSLGY-SPSSFSDMFRRELGVAPSHY 252
             A+  L +G++V+ IA +LGY +PS+F  MFRR  G +P  Y
Sbjct: 228 VHALERLARGEAVADIADALGYATPSNFIAMFRRAFGESPGRY 270