Pairwise Alignments

Query, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  144 bits (362), Expect = 2e-39
 Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 12/239 (5%)

Query: 20  ARTYPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPPGVAHGIRVVSD 79
           A  YP   ++EPHSH   QL+YA+ G+M VE+  E   VPP R VW+P G  H IR V D
Sbjct: 23  ATDYPSDWFIEPHSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGD 82

Query: 80  LQMRNIYLRPALAATLDSQVQVIEVGGLLRELI-----VTLVEEGDSGEAAYYDAVVSLA 134
           ++MR++++R   A  L  Q + I +  LL ELI      T     DS EA     V+ L 
Sbjct: 83  VKMRSVFVRSDAATGLPLQSKAISISPLLSELIKASVGFTAPFAEDSREA----RVMRLI 138

Query: 135 LLELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHHAETAGASVRTLSRLFQ 194
           L E+       ++++ P   D+RL   C A+   P             G   +T+ RLF+
Sbjct: 139 LDEICVLPTLPLKLSQP--SDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFR 196

Query: 195 NNLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGY-SPSSFSDMFRRELGVAPSHY 252
              GM F +WR+Q +L  A+  +  G+ +  +A +LGY SPS+F+ MF+R+ G  PS +
Sbjct: 197 KETGMTFGQWRQQARLMQALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQF 255