Pairwise Alignments

Query, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 236 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  120 bits (302), Expect = 2e-32
 Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 11/238 (4%)

Query: 16  VQPLARTYPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPPGVAHGIR 75
           +Q L R Y  G  V  H H   QL+YA SGVM V +   + V+P   A+W+P GV+H IR
Sbjct: 1   MQALERDYGHGDEVASHCHAEDQLIYAASGVMRVSSEGGSWVIPGGHALWMPAGVSHAIR 60

Query: 76  VVSDLQMRNIYLRPALAATLDSQVQVIEVGGLLRELIVTLVEEGDSGEAAYYDAVVSLAL 135
           +   + MR + L   +      + QVI V GLLRELI+      +  + A+  A++   L
Sbjct: 61  MKGVVCMRTLLLDAHI-----ERCQVIVVSGLLRELILAASRVLNLRDGAHARALI---L 112

Query: 136 LELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHHAETAGASVRTLSRLFQN 195
            EL  ARR  I   +P     RL   C+  +  P+ ++  E        S R+++RLFQ 
Sbjct: 113 YELAAARR--IDAFVPTPQHARLRAWCERFLQDPAQDLTLEQCGAQLNMSARSVARLFQR 170

Query: 196 NLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGY-SPSSFSDMFRRELGVAPSHY 252
            +GM + +WR + ++  +   L  G+ +  +A   GY S S+F+ MF+R LG APS +
Sbjct: 171 EVGMSYGQWRARARVMLSQQCLADGKPILNVALEHGYQSASAFTAMFKRILGHAPSDW 228