Pairwise Alignments

Query, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 265 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  125 bits (315), Expect = 7e-34
 Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)

Query: 9   LSDHAVPVQPLARTYPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPP 68
           + D A+     A +Y RG    PH H  GQLL+A+ GVM VET  +  V+PPQRA+W+PP
Sbjct: 10  IHDDAIGWSRGAISYTRGEVDPPHRHPQGQLLFAIKGVMLVETGSKRWVIPPQRALWIPP 69

Query: 69  GVAHGIRVVSDLQMRNIYLRPALAATLDS-----QVQVIEVGGLLRELIVTLVEEGDSGE 123
              H   V+S  ++R ++  PAL +   S     +V VI    L +ELI  L        
Sbjct: 70  FQEHTYSVLSATELRAVWFSPALISQCGSFKRKEEVHVITATALFKELIAGLFSAQYRPA 129

Query: 124 AAYYDAVVSLALLELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHHAETAG 183
           +    AV+ L +L    +   QI   +P+ VD RL      I+A    +V+ E  AE   
Sbjct: 130 SQRSMAVLLLEIL----SEAQQISAELPMPVDERLHRVACDIIANNLWDVSMERLAEQVA 185

Query: 184 ASVRTLSRLFQNNLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGYS-PSSFSDMFR 242
            S RT SR F  + G  F  WR++ ++  ++  L  G  V  +A  LG+S  ++F+  FR
Sbjct: 186 MSERTFSRAFIKDTGFSFRAWRQRARICASLDLLANGYPVKQVAWMLGFSGQAAFAAAFR 245

Query: 243 RELGVAPSHYV 253
             +G  P+ ++
Sbjct: 246 AVVGATPADFL 256