Pairwise Alignments

Query, 265 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  152 bits (383), Expect = 9e-42
 Identities = 88/238 (36%), Positives = 127/238 (53%), Gaps = 12/238 (5%)

Query: 23  EYPSGTVFPRHTHRRGQFAYASTGALKMFTDLGN--WVVPPQRAIWVPGGISHEMHMRGD 80
           +YPS      H+H + Q  YA  G   M  + GN  W VPP R +W+P G  H +   GD
Sbjct: 25  DYPSDWFIEPHSHTKHQLIYAIKGL--MIVESGNECWTVPPSRGVWMPCGQVHAIRCVGD 82

Query: 81  VVMLNTYLNDDAAQRAGLQDYCQVFGVSPLLRHLLEAALAIGPSASPSVRDRCVLTLLID 140
           V M + ++  DAA    LQ   +   +SPLL  L++A++      +   R+  V+ L++D
Sbjct: 83  VKMRSVFVRSDAATGLPLQS--KAISISPLLSELIKASVGFTAPFAEDSREARVMRLILD 140

Query: 141 EIGAMPELPLSAPLPSEARLARSCQRFLEAPTQKISICEMADWS---SMSRRTFTRNFRE 197
           EI  +P LPL    PS+ RL   C    E P    ++   ADW     +  +T  R FR+
Sbjct: 141 EICVLPTLPLKLSQPSDQRLRVICTALHERPEDNATV---ADWGLRLGVDEKTIQRLFRK 197

Query: 198 CTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSSSAFTSVFRRNLGDSPARY 255
            TGMTF  WRQQ  L++A  R++ G  I DVA  LG+ S SAF S+F+R  G +P+++
Sbjct: 198 ETGMTFGQWRQQARLMQALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQF 255