Pairwise Alignments

Query, 265 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 254 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  163 bits (413), Expect = 3e-45
 Identities = 94/252 (37%), Positives = 135/252 (53%), Gaps = 7/252 (2%)

Query: 4   TFSFSPYEPDSPEAVVTLREYPSGTVFPRHTHRRGQFAYASTGALKMFTDLGNWVVPPQR 63
           TFSF  + P  P A     +Y  G   P H H   Q  +  +G +++ T  G WVVPP R
Sbjct: 6   TFSFI-HRPLVPFA----HDYVHGDSEPWHEHDCAQLLHTLSGVVRVDTASGCWVVPPGR 60

Query: 64  AIWVPGGISHEMHMRGDVVMLNTYLNDDAAQRAGLQDYCQVFGVSPLLRHLLEAALAIGP 123
            +W+P G  H + + G+V     ++  D   RA L   CQ+  ++PLLR L+  +L +  
Sbjct: 61  GVWLPAGTRHSLRITGNVAARTLFI--DPLARADLPATCQIVQIAPLLRELILVSLDLPE 118

Query: 124 SASPSVRDRCVLTLLIDEIGAMPELPLSAPLPSEARLARSCQRFLEAPTQKISICEMADW 183
           S SP  RD  V  L++DEI  MP LP   P P    L   C +  +   +  S  + A  
Sbjct: 119 SYSPGSRDERVYELILDEIRTMPVLPFHLPEPETEALRHLCLQIRQNAGESWSSAQAASM 178

Query: 184 SSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSSSAFTSV 243
            +MS RT  R+F++ TG++F  W ++  LLEA  RL+ G  +  VA ELG+ S SAFT++
Sbjct: 179 MNMSERTLNRHFQQQTGLSFGEWLRRARLLEALVRLAQGQPVLRVALELGYGSHSAFTAM 238

Query: 244 FRRNLGDSPARY 255
           FRR +G SP+ Y
Sbjct: 239 FRRVMGVSPSDY 250