Pairwise Alignments

Query, 288 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 285 a.a., HTH-type transcriptional regulator YofA from Alteromonas macleodii MIT1002

 Score =  115 bits (289), Expect = 9e-31
 Identities = 72/254 (28%), Positives = 131/254 (51%), Gaps = 4/254 (1%)

Query: 5   LKPLDIDTVQAFVLVADFASFTRAAEALDTSQAAISLKLKRLEERLGYRLLERTPRHVRL 64
           +K L ID +++FVL+A   S+T+ AE L  +Q AISL++K+LEE +G +L  R    + L
Sbjct: 1   MKNLSIDFLRSFVLIAQTGSYTQCAEQLQRTQPAISLQIKKLEEMIGEKLFSRDKNRLAL 60

Query: 65  SPRGEQFIVAARALLNAHERALADMGNP-LLRRLVIGISDHVAGPDLPTWLSRLAAYDPL 123
           +  G + +     ++  +++A+A+ G P +   + +GI    +   +P  + R     P 
Sbjct: 61  TGAGSRLLSYGEKIVALNDQAMAEFGKPQVTGNIRLGIPSEFSTTLMPKIIRRFTQTYPE 120

Query: 124 VILEVRIASSRDLVAAFDRNELDAVIVRNE--GDRQDGEVLAVERFGWFAAPTWQHSPGA 181
           + LEV  A S+DL++   +++ D ++   E    +QDG +++ ++  W  +  + +S  A
Sbjct: 121 ISLEVHCALSKDLLSEPLKSQFDLILSLQETPDPQQDGYIIS-DQLVWVGSQRFVNSVPA 179

Query: 182 PLRMATMAAPCGVRHLATRALDEARIDWTEVFVGGGVMAVGAAVSAGLGVAALAHRVAPT 241
            L +    +PC  R  AT  L   +  W  V+    +  +  A++ GLG+  LA    P+
Sbjct: 180 KLPIIAAPSPCIYRKRATNLLSAIKKPWQVVYTIADLNGIQTAINEGLGITVLAKSSVPS 239

Query: 242 GAVEVSEQYGLPPL 255
           G   +S    LP L
Sbjct: 240 GLHVLSNSESLPEL 253