Pairwise Alignments

Query, 566 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 440 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 47/284 (16%)

Query: 75  VVAAGPTAAPGDVRVQYVPQAVKDQIRDQVKAEVMATAKQENWAQPNTFPD---WVSRIS 131
           + AA  T    ++      Q +  Q + +   ++ ATAK+ N  + ++F     W ++  
Sbjct: 42  ITAAQYTELQSELAKDQKEQQIARQAQQETNEQIAATAKKTN--ELSSFDQKLAWAAKTQ 99

Query: 132 FDGDIRLRDESRYFSGNNSNEIVDYAKLNESGPYDTNKDTNTKLPPLLNTTKDRENLFRL 191
           F GD+R R E+    G ++N   D                           KDR+   R+
Sbjct: 100 FKGDVRFRQETVKIQGESNNGGRD---------------------------KDRQ---RI 129

Query: 192 RARLGMKAVLSPDWTAGIRVGTGSDNNPVSTTQTLGGGFGKKDIWLDQGYLSW--KATPD 249
           RARLG    ++     GIR+ TGS ++  ST Q     F KK IWLD GY+ +      +
Sbjct: 130 RARLGAYTEINSQVDTGIRIATGSSDDARSTNQDQDNYFDKKSIWLDLGYIDYHPDQIKN 189

Query: 250 VTLTAGRFANPFYST-DMMYSGDLNFDGIAANFNHALNSQWGLFGTLGAFPVEYTSDSAS 308
           + +  G+   P+ S  D+++  D+N +G+A  + + L S   LFG+LG + ++   D+  
Sbjct: 190 LHVIGGKMLQPWVSMGDVIWDSDINPEGLALTYKYPLGSSAELFGSLGNYNLK---DNVD 246

Query: 309 SNGFD-KEDSETKWLFGGQIGANWKI--NRENSLKGAVAYYHFD 349
            +G   + D     L  GQ+G  + +  N + +L G+V  Y  D
Sbjct: 247 GDGVQFRHDLR---LTSGQLGTRFSVTDNLKMTLGGSVYAYQND 287



 Score = 37.7 bits (86), Expect = 9e-07
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 4/107 (3%)

Query: 464 GQFESGGNALMVSFTLGSALEMRKRGDWNVLAGYKYIQPDALPDGFNDSSFHLGGTNAKG 523
           GQ+    +A+    T        K   +N+   Y+ IQ +A+   F DS F  G T ++G
Sbjct: 334 GQYVKNNDAVTDQDTAWLIGAKSKVFGFNLDYNYRDIQRNAVVGAFTDSDFANGTTGSRG 393

Query: 524 YFIGANYGIEKNIYASARWLSASQVYGAPFEVD----VMQLELNTRF 566
           + +  +Y I+KN    A +      Y +  + D     +QL+   +F
Sbjct: 394 HKMKVSYDIDKNFALGATYFLTKADYASRTQRDANTNTLQLDAEAKF 440