Pairwise Alignments

Query, 442 a.a., cysteine desulfhydrase from Pseudomonas simiae WCS417

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  140 bits (352), Expect = 1e-37
 Identities = 131/459 (28%), Positives = 194/459 (42%), Gaps = 59/459 (12%)

Query: 5   AMASFMLSAHADFIDDSHADVTLLNRYLNQQGRD----VVNSNAKAHSI-RDWGQGFEFN 59
           A  +F  S    FID +   V   N + +Q  R+    +  +N +  S+ R+WG G   N
Sbjct: 18  ASPAFADSDDEGFIDGTRVHVLNRNFFFSQDYRNGDFTLNPNNGERQSLHREWGHGIIAN 77

Query: 60  FKSGYTDGPVGFGLDLQAFYGLKLDSGGDL--NDKDHQG--RYPGSMFPLDNGKSADQFG 115
            +SG+T G VGFG+D+Q   GLKLD G     N     G     GS F   +G+  D +G
Sbjct: 78  LQSGFTRGTVGFGVDVQGLVGLKLDGGNGAVGNGVGVPGIVSRSGSNF---DGEPKDSYG 134

Query: 116 VLSPTFKMRFAQDELRVGTLYGNNPILANTDGRLYQQTNTGVQLVSKDLSDFTFTGGDIF 175
            +    K+R    ELR G +   +P+L  +D RL  QT  G    +  L   +  GG + 
Sbjct: 135 KVGTALKVRAFDTELRYGDVSPTSPVLHASDIRLLPQTLRGFIFNNNSLDGLSLQGGKLE 194

Query: 176 KTKIRNET---GDQGMITAGGTQQSDRFLFGGADYTGIQNTTVSLWYSNLEDYYQQFFLG 232
            +  RN +   GD G + AG  + ++  ++ G DY      T+ L  S L+D + Q F  
Sbjct: 195 SSSDRNASNHRGDLGTVYAGRIKGANDVVYLGGDYRFNDQLTLRLHSSRLDDVWNQSFFS 254

Query: 233 AKRHDAL-SVGAIDTDLRVFRSLGVGGNAAGDNDYAASGLYGDGASKGRINQTTASLLES 291
                 L S  ++ T L  +R+   G                  A  G+I+  + S+   
Sbjct: 255 VDHVQPLGSELSLKTGLNYYRTRDSG-----------------QALAGQIDNDSWSVHAG 297

Query: 292 YSLDGHTVGLGIQKNSGDSDFPYLDSGLNSGDNRQGPGSGADTPALTNLQLNKFQHAGER 351
            +   H   L   +  GD+ F Y+    N+ D +    S          Q++ F +  ER
Sbjct: 298 LAAGAHGFKLSYTRIDGDTPFDYV---WNTYDLQLDAAS----------QVSDFNNPNER 344

Query: 352 TWLAQYKYDFGKLGLTGLTFSAAYAHGDDI--RTAQGTTS---------EWERNVAVAYQ 400
            W A+Y YDF  LG+ GL+ +A Y  G DI    A G  S          WERN+ + Y 
Sbjct: 345 AWEARYDYDFAPLGVPGLSLTARYVRGTDIDGTRAGGAYSYFNGTEDGRHWERNLWLKYV 404

Query: 401 VPTGSLKGLGVTWKNA--HASPDISGATVQDENRFYVSY 437
           + +G  K L      A      D    +  DE R  V Y
Sbjct: 405 LQSGPAKDLSFNLMQATHRVGGDHVAESNVDELRLIVQY 443