Pairwise Alignments

Query, 403 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

 Score =  250 bits (639), Expect = 5e-71
 Identities = 163/408 (39%), Positives = 227/408 (55%), Gaps = 20/408 (4%)

Query: 1   MNRYRYEAADANGNVEAGHVEADSQSAAFANLRSRGLTALLVQIEGNQQAAAGSSLFTAK 60
           M  YRY+A D  G      ++ADS+  A   LR +GL A  +Q    +  A        +
Sbjct: 1   MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQ----RHDAGSRQPRRQR 56

Query: 61  LSDNDLAWATRQLASLLGASLPLEAALSATVEQAEKKHIAQTLSAVRADVRGGMRLADAL 120
           LS   L   TRQLA+L GA +PL  AL+    Q  +  +   L A+R  +  G+ LA +L
Sbjct: 57  LSRAQLCELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGLARSL 116

Query: 121 AARPRDFPSIYRALIAAGEESGDLAQVMERLADYIEERNNLRGKILTAFIYPGVVGLVSI 180
           A +   F  +Y AL+ AGE SG LAQV+ RLAD++E+    + K  TA IYP V+  VS+
Sbjct: 117 ARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLMGVSL 176

Query: 181 GIVIFLLSYVVPQVVSAFSQARQDLPGLTLAMLNASDFVRAWGGLCFAG--------MVG 232
            +VI L+++VVP++   F+ A Q LP +T  ++  S       GL  AG        ++G
Sbjct: 177 AVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQ------GLVHAGPWLLGVALLLG 230

Query: 233 GFWSWRLYLRNPVARLSWHSRVLRLPLIGRFVLGLNTARFASTLAILGGAGVPLLRALEA 292
           G   W   LR P   L     +LRLP IG  +  L +AR A +LAIL G+GV LL AL+ 
Sbjct: 231 GLAGW--LLRKPHWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQV 288

Query: 293 ARQTLSNDRLSQCVNDATAKVREGVNLAPALAVEKVFPPVLIHLIASGEKTGALPPMLER 352
           A +T+ N R+   +      V+ G +L  AL   + FPP+L++++ SGE +G L  MLER
Sbjct: 289 ATETIGNRRIRLAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLER 348

Query: 353 AAQTLSRDIERRAMGMTALLEPLMIVVMGAVVLVIVMAVLLPIIEINQ 400
            A    R   R+     AL EPLMI+VMGAVVL IV+AVLLPI+++NQ
Sbjct: 349 VADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQ 396