Pairwise Alignments

Query, 472 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

Subject, 577 a.a., type II secretion system ATPase GspE from Rhodanobacter sp000427505 FW510-R12

 Score =  387 bits (994), Expect = e-112
 Identities = 220/487 (45%), Positives = 301/487 (61%), Gaps = 25/487 (5%)

Query: 4   LPYAWAKSQRIL-LRPGDQGMLLTVCPSTPGWSISEVHRQFGQTHLEQVR-DDELDGLLT 61
           L   + K Q ++ ++ G+ G+ L V      + +  V    G+    +V    E+DGL+ 
Sbjct: 96  LSLRFLKQQHVVPVQDGEHGLALLVADPADPYPLQAVALAAGRPVALRVGLRSEIDGLIE 155

Query: 62  SAYADTGSAAAVVGAAENEVDLDRLMQDMPEITDLLDTQDGAPVIRMINALLTQAARDEA 121
             Y    SA   +   EN   LD    +  ++  L D    APVIR++N +L +A    A
Sbjct: 156 RYYGTGRSAMGTI--VEN---LDGSAAEEDDVEHLRDLASEAPVIRLVNLILQRAVEQRA 210

Query: 122 SDIHIEPYETHSVVRYRVDGTLRDVVSPRKALHGALVSRIKIMAQLDIAEKRLPQDGRIA 181
           SD+HIEP+E    VRYR+DG L +V +P  +   A++SR+KIMA+L+IAE+RLPQDGRI 
Sbjct: 211 SDVHIEPFENRLKVRYRIDGVLHEVEAPPSSSTAAVISRVKIMARLNIAERRLPQDGRIQ 270

Query: 182 LRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLQLETLGMAPQLLARLDTLIRQPHGI 241
           LRV G+ +D+RVSTVPT  GE VVMR+LD+++      +LG   +   R   ++ +PHGI
Sbjct: 271 LRVQGKELDLRVSTVPTSFGESVVMRILDRESVVFDFASLGFTDRFQQRFVDVLERPHGI 330

Query: 242 VLVTGPTGSGKTTSLYAALARLDASTSNILTVEDPVEYDLPGISQIQVNAKIDMTFGLAL 301
           +LVTGPTGSGKTT+LY AL+R++ +   I+TVEDPVEY L GI+QIQV  +I + F  AL
Sbjct: 331 LLVTGPTGSGKTTTLYTALSRINTNDVKIITVEDPVEYQLEGINQIQVKPQIGLDFSGAL 390

Query: 302 RAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAVNRLIDMGVEPFL 361
           R+I+RQDPD+IMIGE+RDLET +IA+Q++LTGHLVL+TLHTN A   + RL+DMGVE +L
Sbjct: 391 RSIMRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHTNSAAGGITRLLDMGVEDYL 450

Query: 362 LASSLLGVLAQRLVRRLCPHC-----------------KQEDPSAPGTWRPVGCAQCNQI 404
           L S++ G+LAQRLVRRL P                   K  D      W+P G    N  
Sbjct: 451 LGSTINGILAQRLVRRLDPETAMPYDALPEVIEQFELHKYTDERPIRLWKP-GSNAANPS 509

Query: 405 GYSGRTGIHELFCVDDDVRSLIHQGANEQDLRLAARRAGMFSMREDGERWVHSGATAPEE 464
           GY GR  I E   + D +R L+ Q A+E D+   AR  GM +M EDG     +G T  EE
Sbjct: 510 GYRGRRAIMEFLTMSDPLRRLVMQRASEGDIERQARSEGMRTMYEDGIAKAVAGITTLEE 569

Query: 465 ILRVTRD 471
           +LRVT++
Sbjct: 570 VLRVTQE 576