Pairwise Alignments

Query, 666 a.a., choline transporter from Pseudomonas simiae WCS417

Subject, 527 a.a., BCCT transporter from Pseudomonas simiae WCS417

 Score =  222 bits (565), Expect = 4e-62
 Identities = 149/519 (28%), Positives = 247/519 (47%), Gaps = 28/519 (5%)

Query: 21  FAATFILLFGITVIAIPQQAGAWLLAAQ---NWAANTVGWYYMLAMTLYLVFVVVTALSG 77
           F  TF++L    VIA      A+L  ++   N       W +       +V   +   S 
Sbjct: 10  FWPTFLILLA-AVIASYIDLNAFLAVSKQLNNLILKNFSWLFSAGSFAMVVLTAIVYFSA 68

Query: 78  YGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAPMNADAAR 137
            GK+++G +  +P  S   W  +     +++ + F+  +EPL HL  PP   P+ A ++ 
Sbjct: 69  LGKVRIGGEDAQPLLSKWRWFMVALCTTLAVGVLFWTTAEPLYHLYGPPTSLPIEAGSSA 128

Query: 138 Q---AMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGYA 194
               AM  +FLHW +  + ++    +  A   Y      ++ + L PL+G+         
Sbjct: 129 AKTFAMSTMFLHWTITPYAIYLVPSLVFALVFYNRRSNFSIGAMLEPLLGEARVKRYAGL 188

Query: 195 VDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVAVAGV 254
           +D   + A V G+ + +G G L L  GL    G   T      +I +++   +  A +G+
Sbjct: 189 IDTLAMFALVAGMASSLGTGALTLAGGLAQYIGGETTPLRLAIIIAIIVITFVASAASGL 248

Query: 255 DKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVYAYDKPS 314
            KG+ ++S  N  +  AL LFVL  GPT ++ +  ++++G YL    ++S    A    +
Sbjct: 249 QKGIVMLSSFNTWIMLALGLFVLLCGPTLYMFSLGVESLGVYLDTFFSRSLFTGAASGDT 308

Query: 315 DWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIF-GNS 373
            W   WTVFYW+ W AW+P   LF+ +I RG T+REF+   +L P  FT  W+ IF G S
Sbjct: 309 -WPHSWTVFYWSVWFAWAPVSALFLGKIGRGYTVREFIHINMLYPALFTAVWICIFSGTS 367

Query: 374 AIDQVLNHGLV--ALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISFVFFVTSADSGT 431
                L  G +   L +  ++     LY + +  P S  +IA  +F++F+ FVT+ADS T
Sbjct: 368 LYFDALGDGSLNRVLNEQGVEH---VLYQMFQQLPASGLMIAFLLFVAFISFVTAADSST 424

Query: 432 VVLSTLSSKGGNADE--DGPKWLRVFWGAMTALVTSALLFAGSIDSLKSAVVLTSLPFSM 489
            V++ L SKG  AD   DG   L++ WG +   V+  ++    ID +K    L  LP  +
Sbjct: 425 DVIANLCSKGVTADSDLDGNPALKIVWGVIIGSVSWVMVSFVGIDGVKMLSNLGGLPGML 484

Query: 490 ILLLMMWGLHKAFYLES----------QKQIAQLHSLAP 518
           ++LL    L   F+L++          +    +LHS +P
Sbjct: 485 LVLLASTSL--IFWLKNPALLDVKRHQRTPATELHSASP 521