Pairwise Alignments

Query, 666 a.a., choline transporter from Pseudomonas simiae WCS417

Subject, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

 Score =  352 bits (903), Expect = e-101
 Identities = 185/515 (35%), Positives = 293/515 (56%), Gaps = 27/515 (5%)

Query: 14  MNAPVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVVT 73
           +N  V  ++   ++ F +      + A A    A ++      W+Y++++T  L  ++  
Sbjct: 11  LNPTVTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYL 70

Query: 74  ALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAPMNA 133
             S +G +KLG D D+PEFS+ SW  MLF+ G+ I L F+ V+EP+ H    P    +  
Sbjct: 71  MCSKFGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGLTD 130

Query: 134 DAARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGY 193
           +AA  AM+I   HWGLH W +F  VG+ LAYFAYR  LPL++RS LYPLIG+RI GPIG+
Sbjct: 131 EAATTAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGPIGH 190

Query: 194 AVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVAVAG 253
            VD   ++ T FG+   +G GV+ +N+GL  +F +  +  +Q+ LI L+     +  +AG
Sbjct: 191 VVDILAVVITAFGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMAG 250

Query: 254 VDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVYAYDKP 313
           V +G++ +S+ NMLL+  L++ +L  GPT++++N ++++ GDY   +   SF      K 
Sbjct: 251 VSRGMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSF-WSDTQKD 309

Query: 314 SDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGNS 373
           S W   WT FYW WW+ W PFVGLFIARIS+GR+IRE + G LL+P   T+ WMS+FG +
Sbjct: 310 SGWQNWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFGGT 369

Query: 374 A-----IDQVLNHGLVALGQSAID---------------DPSMSLYLLL---ETYPWSKT 410
           A     +D+  +  LVA G+   D               + + +++ LL   +     K 
Sbjct: 370 ALKAEQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAGTLGKV 429

Query: 411 VIAVTVFISFVFFVTSADSGTVVLSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFA 470
           +  +   +   +F+TSADSGT VL TL+S G     + P+ +R+ W  +   +  ALL A
Sbjct: 430 LSVLVCILLATYFITSADSGTQVLCTLNSMG---SANPPQSIRLLWCILEGAIAMALLMA 486

Query: 471 GSIDSLKSAVVLTSLPFSMILLLMMWGLHKAFYLE 505
           G + +++ A +   LP +  +LL+ + L ++   E
Sbjct: 487 GGLKAIQMASIAAGLPIAGFILLISYTLMRSLRQE 521