Pairwise Alignments

Query, 666 a.a., choline transporter from Pseudomonas simiae WCS417

Subject, 657 a.a., choline/carnitine/betaine transporter BetTC from Pseudomonas putida KT2440

 Score =  620 bits (1598), Expect = 0.0
 Identities = 309/665 (46%), Positives = 427/665 (64%), Gaps = 9/665 (1%)

Query: 1   MSASSTPSSGQVRMNAPVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYM 60
           M+A+  P S    +N PVFY +A  + L  +   A  + A       Q W      W+Y+
Sbjct: 1   MTAAPKPRS---TLNPPVFYTSAILVFLLVLYATAFQEHAQTLFEQVQRWIITNASWFYI 57

Query: 61  LAMTLYLVFVVVTALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLT 120
           L + L L+ VV  A+S YG IKLG DH EP++   SW  MLF+AG+ I L FF V+EP+ 
Sbjct: 58  LVVALVLISVVFLAVSRYGDIKLGPDHSEPDYRKSSWFAMLFSAGMGIGLMFFGVAEPVM 117

Query: 121 HLVQPPQGAPMNADAARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALY 180
           H   PP G P    AAR+AM+I F HWGLH W ++A V + LAYF++R+ LPL LRSALY
Sbjct: 118 HFSTPPVGDPGTVAAAREAMKITFFHWGLHAWAIYAIVALILAYFSFRNGLPLTLRSALY 177

Query: 181 PLIGKRINGPIGYAVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLIT 240
           PLIG+RI GPIG+AVD F I+ TVFG+   +G+GVL +NSG  ++FG+     +QV LIT
Sbjct: 178 PLIGERIYGPIGHAVDVFAILGTVFGVATSLGYGVLQINSGFHHVFGLPVNTTVQVILIT 237

Query: 241 LMMGAAIIVAVAGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGAL 300
                A +   +G+DKG+R++S++N+ LA  L+LFVL  GPT  LL T +QN G YL  +
Sbjct: 238 ATCALATLSVASGLDKGIRILSELNLSLAVILMLFVLLLGPTVFLLQTYVQNTGAYLSDI 297

Query: 301 PTKSFDVYAYDKPSDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPL 360
             K+F++YAY+ P+DW+GGWT+ YW WW++WSPFVGLFIARISRGRTIREFV GVL +P 
Sbjct: 298 VNKTFNLYAYE-PTDWIGGWTLLYWGWWLSWSPFVGLFIARISRGRTIREFVCGVLFVPA 356

Query: 361 GFTLAWMSIFGNSAIDQVLNHGLVALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISF 420
           GFTL WM++FG+SAI  +LN G+  L     +D S++L+  LE +P+S  +  V V +  
Sbjct: 357 GFTLLWMTVFGDSAIHMILNDGVKDLAAVVSEDSSLALFAFLEHFPFSSIISLVAVLMVV 416

Query: 421 VFFVTSADSGTVVLSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAGSIDSLKSAV 480
           VFFVTSADSG +V+  L+S G       P W R+FW      V  ALL A  + +L++A 
Sbjct: 417 VFFVTSADSGALVVDMLASSG---QGHSPLWQRIFWSVCIGAVAIALLLANGLKALQTAT 473

Query: 481 VLTSLPFSMILLLMMWGLHKAFYLESQKQIAQLHSLAPVSAARKGRGGWRQRLSQAVHFP 540
           + ++LPF++ILL+ +WGL KA  L++ ++  +  +L      R   GGW++RL      P
Sbjct: 474 IASALPFAVILLVAIWGLFKALSLDATRRGLRNQALPGPRHTRHPHGGWQRRLRNIALMP 533

Query: 541 SRDEVYRFLESTVRPAIEEVTAVFVEKGLNVVTQPDPSNDSVSLEIGHGEERPFVYQVQM 600
            R  V RF+   VRPA EEV     ++G  V    +  +  VSLE+ H  E  F+Y+V+ 
Sbjct: 534 RRVHVTRFIAEVVRPACEEVAQELRKQGYEVSVN-ERDDGRVSLELSHAGEGRFLYEVRP 592

Query: 601 RGYFTPSFARGGMGSKEINNRRYYRAEVHLAEGSQDYDLVGYTKEQIINDILDQYERHLQ 660
           R + TPSF          ++R+Y+RAEVHL EG QDYD++G++++ +I DILDQYERHL 
Sbjct: 593 RAFNTPSFVMRDT-EDGADSRKYFRAEVHLREGGQDYDIMGWSRDDVIGDILDQYERHLH 651

Query: 661 FLHLV 665
           +LH+V
Sbjct: 652 YLHVV 656