Pairwise Alignments

Query, 666 a.a., choline transporter from Pseudomonas simiae WCS417

Subject, 581 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

 Score =  355 bits (912), Expect = e-102
 Identities = 187/501 (37%), Positives = 292/501 (58%), Gaps = 29/501 (5%)

Query: 18  VFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVVTALSG 77
           VF F +   + F +          +   +AQ+W     GW+++L  +L++VFV+  A S 
Sbjct: 37  VFGFTSLLAIAFVLWGFLNQASLASSASSAQSWVILNFGWFFVLTSSLFVVFVLWLAASR 96

Query: 78  YGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAP--MNADA 135
           YG++ LG D ++PEF  +SW  M+F+AG+ I L FF V+EPL+H + PP G+     ++A
Sbjct: 97  YGRVPLGRDGEQPEFRTVSWVAMMFSAGMGIGLMFFGVAEPLSHYISPPPGSASGQTSEA 156

Query: 136 ARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGYAV 195
            + AM     HW LH W ++A VG+ +AY  +R      + +A  PLIGK  NGP+G  +
Sbjct: 157 MQVAMATTLFHWTLHPWAMYAIVGLVIAYGTFRRGRSQLISAAFRPLIGKHANGPLGRLI 216

Query: 196 DGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQ-------VGLITLMMGAAII 248
           D   I AT+FG  A +G G L +  GL+Y        WI+       + +ITL+  A + 
Sbjct: 217 DMMAIFATLFGSAASLGLGALQIAGGLEY------NGWIESPGKLFYISIITLLTIAFVT 270

Query: 249 VAVAGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVY 308
            AV+G+ KG++ +S+ NM+LA  L +FV   GPT  +LN L  ++G Y+  LP       
Sbjct: 271 SAVSGIGKGIQWLSNTNMVLALVLAVFVFMVGPTLLMLNLLPTSLGIYIKMLPEMMARTN 330

Query: 309 AY--DKPSDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAW 366
           A   ++ + WL GWTVFYWAWWI+W+PFVG+FIARISRGRTIR+FV GVLL+P   +L W
Sbjct: 331 ASGGEQMNSWLAGWTVFYWAWWISWTPFVGMFIARISRGRTIRQFVTGVLLVPSLVSLVW 390

Query: 367 MSIFGNSAIDQVLNHGLVALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISFVFFVTS 426
            +IFG +AI+ V   G   L   A++  + +LY LL++YP +     + + +  +FFV+ 
Sbjct: 391 FTIFGGAAIEAV-REGAFQLANGAVNS-NHALYQLLDSYPLASATSVLVMILVGIFFVSG 448

Query: 427 ADSGTVVLSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAG-------SIDSLKSA 479
           AD+ ++V+ TLS  G  A     +   +FWG +T  V + +L  G       ++  L++ 
Sbjct: 449 ADAASLVMGTLSEHGTTAPS---RRTVIFWGTLTGTVAAIMLAIGDPGNPGEALTGLQNL 505

Query: 480 VVLTSLPFSMILLLMMWGLHK 500
            ++ +LPF ++++L+   L++
Sbjct: 506 TIVVALPFVVVMVLLCLALYR 526