Pairwise Alignments

Query, 666 a.a., choline transporter from Pseudomonas simiae WCS417

Subject, 536 a.a., BCCT family transporter YeaV from Escherichia coli ECRC62

 Score =  207 bits (526), Expect = 1e-57
 Identities = 146/503 (29%), Positives = 246/503 (48%), Gaps = 36/503 (7%)

Query: 13  RMNAPVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVV 72
           + + P+   +   IL     +   PQQ+     A   +   T+G    + + L +  V+ 
Sbjct: 7   KKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTFVTRTLGSAVQVLVLLAMGLVIY 66

Query: 73  TALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQG-APM 131
            A S YG I+LG    +PE+S LSW  M   AG+  +  ++ V+E   +   P    AP 
Sbjct: 67  LATSKYGNIRLG--EGKPEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPR 124

Query: 132 NADAARQAMQILFLHWGLHGWGVFAFVGMALAY-FAYRHNLPLALRSALYPLIGKRINGP 190
           +  A   ++   F HWG+  W  +    + +AY F  R N  L+L   +  + G R  GP
Sbjct: 125 SQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVRPQGP 184

Query: 191 IGYAVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVA 250
            G  VD   +IATV  L   +         GL  L G+     +Q  +I L  G   + +
Sbjct: 185 WGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIFCLSS 244

Query: 251 VAGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSF-DVYA 309
             G++ G++ +S +    A  L L VL  GPT+ + +++I  IG     L T++F  +  
Sbjct: 245 WIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITSSIINAIG-----LTTQNFLQMSL 299

Query: 310 YDKP---SDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAW 366
           +  P     +   WTVFYW WWI+++P V +F+ R+SRGR I+E ++G++   LG T+  
Sbjct: 300 FTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLI---LGSTVGC 356

Query: 367 MSIFG---NSAIDQVLNHGLVAL--------GQSAIDDPSMSLYLLLETYPWSKTVIAVT 415
              FG   + AI Q +N G++ +        G++A+    MSL       P  K  +A  
Sbjct: 357 WFFFGVMESYAIHQFIN-GVINVPQVLETLGGETAVQQVLMSL-------PAGKLFLAAY 408

Query: 416 VFISFVFFVTSADSGTVVLSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAG-SID 474
           + +  +F  +  D+    ++  S++     +D  + LR+FW  +  L+  ++LF G S++
Sbjct: 409 LGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLE 468

Query: 475 SLKSAVVLTSLPFSMILLLMMWG 497
           ++K+ VVLT+LPF +ILL+ + G
Sbjct: 469 TMKTTVVLTALPFLVILLVKVGG 491