Pairwise Alignments

Query, 666 a.a., choline transporter from Pseudomonas simiae WCS417

Subject, 656 a.a., High-affinity choline transport protein from Alteromonas macleodii MIT1002

 Score =  565 bits (1457), Expect = e-165
 Identities = 282/654 (43%), Positives = 407/654 (62%), Gaps = 8/654 (1%)

Query: 14  MNAPVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVVT 73
           +N PVF  ++  IL   I     P+ A A     Q+       W+Y+  + + +VFVV  
Sbjct: 10  LNKPVFITSSALILCLLIFAAGAPETADALFQKLQSAIVTNGSWFYVFTVAVIVVFVVFL 69

Query: 74  ALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAPMNA 133
            +S YG+IKLG DH  PEFS+ +W  MLFAAG+ I L FF V+EPL H + PP     + 
Sbjct: 70  GMSRYGEIKLGPDHASPEFSFGTWLSMLFAAGMGIGLMFFGVAEPLMHFLAPPTAQAESI 129

Query: 134 DAARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGY 193
           DA R+AM+  F HWG+H W ++A V + L YFAYR NLPL LRSALYPLIG RI G  G+
Sbjct: 130 DAVREAMKTTFFHWGVHAWAIYAVVALILGYFAYRQNLPLTLRSALYPLIGDRIYGWPGH 189

Query: 194 AVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVAVAG 253
            VD F + +TVFG+   +G G   +N+G +YLFG+     +Q+ ++  ++G A+I    G
Sbjct: 190 VVDIFAVTSTVFGVSTSLGLGASQVNAGFNYLFGLPSNTGVQIAIMAGVIGLAVISVTTG 249

Query: 254 VDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVYAYDKP 313
           ++KG+R +S+ NM+LA  LLL VLF GPT  LL   +QN G YL  L   +F+++AY+K 
Sbjct: 250 LEKGIRRLSETNMVLALLLLLIVLFLGPTVFLLQAFMQNTGAYLSDLVRNTFNLFAYEK- 308

Query: 314 SDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGNS 373
           +DW+GGWT+FYW WW+AW+PFVGLFIARIS GRTIREFV GVLLIP  FTL WM++FGN+
Sbjct: 309 TDWIGGWTIFYWGWWLAWAPFVGLFIARISYGRTIREFVMGVLLIPSAFTLFWMTVFGNA 368

Query: 374 AIDQVLNHGLVALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISFVFFVTSADSGTVV 433
           AIDQVL  G   L Q   +D S++L++ LE +P++  +  + V +  VFFVTS DSG +V
Sbjct: 369 AIDQVLVQGKDVLAQMVNEDSSVALFVFLEQFPFASVLSLIAVLMVIVFFVTSCDSGAMV 428

Query: 434 LSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAGSIDSLKSAVVLTSLPFSMILLL 493
           +  L S G N   + P W RV+W     +V+S LL+AG + +L++  +  +LPF+++LL+
Sbjct: 429 VDMLCSHGEN---NTPLWQRVYWAVGVGVVSSVLLYAGGLGALQTMTIAAALPFAIVLLI 485

Query: 494 MMWGLHKAFYLESQKQIAQLHSLAPVSAARKGRGGWRQRLSQAVHFPSRDEVYRFLESTV 553
            + GL KA  +E+ K+   L  L            W++RL   V FP    V R++   V
Sbjct: 486 AIAGLLKALRIEAYKR-ESLQVLTGTPQHNDSDKNWKERLENIVTFPDETAVRRYINKVV 544

Query: 554 RPAIEEVTAVFVEKGLNVVTQPDPSNDSVSLEIGHGEERPFVYQVQMRGYFTPSFARGGM 613
           +PA+ EV+  F  K      + + +++++ L +  G +  F+Y V       P F     
Sbjct: 545 KPALIEVSEEF--KAQQFEIKIEDTDEALILTVDMGNDPEFIYAVHPVSTEQPEFGPSDT 602

Query: 614 GSKEINNR-RYYRAEVHLAEGSQDYDLVGYTKEQIINDILDQYERHLQFLHLVR 666
            + + N +  YYRAEVHL+EG Q+YD++G++K  +IND++D Y +H  F+HL++
Sbjct: 603 PALDENKKATYYRAEVHLSEGGQNYDIMGWSKISVINDVIDHYHKHQHFIHLLK 656