Pairwise Alignments

Query, 181 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score =  196 bits (498), Expect = 2e-55
 Identities = 99/170 (58%), Positives = 131/170 (77%)

Query: 12  LFLASYEDFKVRLRKRLGSEDLANDVLHETYLRVDRMEVPPNLAQPNAYLYRMALNIAAD 71
           L  + Y DF+ RLR+R GS+D+A+DVLHET+LRV+RM  P  +A P AYL R+A N+A D
Sbjct: 13  LLTSRYVDFRNRLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAED 72

Query: 72  RRQADARLLTGSEVEELLQSADEAQDPSRVVGGQKEIQSLVKALYELPARRRKILIAARL 131
           RR A+ RLL   EVEELL  AD+++DP+RV   + E+Q+L +AL ELP RRR+I +A+R+
Sbjct: 73  RRIANGRLLDFVEVEELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFLASRV 132

Query: 132 EEAPHLEISQRFGISTRMVEKEIKAALGHCAKRLERKVIQRFGPGAGKPS 181
           +E PH +I+ R+G+S R+VE+E+KAAL HCA RL R VIQRFGPGAGK S
Sbjct: 133 DETPHKDIALRYGVSVRIVEREVKAALVHCAGRLGRDVIQRFGPGAGKQS 182