Pairwise Alignments

Query, 181 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 73.6 bits (179), Expect = 2e-18
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 13  FLASYEDFKVRLRKRLGSEDLANDVLHETYLRVDRMEVP-PNLAQPNAYLYRMALNIAAD 71
           FL  Y +      ++L S   A D+ H+ ++RV  +E P   + QP AYL++ A NIA D
Sbjct: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRV--LETPREQVEQPRAYLHQAARNIAVD 64

Query: 72  R-RQADARLLTGSEVEELLQSADEAQDPSRVVGGQKEIQSLVKALYELPARRRKILIAAR 130
             R+ D R     E  E  + A  + DP   V   +   S+ +AL ELP   R++ I  +
Sbjct: 65  GFRREDRRQALEREAFE--EGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQK 122

Query: 131 LEEAPHLEISQRFGISTRMVEKEIKAALGHCAKRLE 166
           LE     EI++R G+S  MVEK +   L H  + L+
Sbjct: 123 LEGLTQAEIAERMGLSKNMVEKYMIRTLRHLREHLD 158