Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 295 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  115 bits (287), Expect = 2e-30
 Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 6/281 (2%)

Query: 1   MNWDDARVFLAVCRESTLRGAARVLGVDQATVGRRVNALEKSLSATLFLRTSEGYALTAV 60
           M WDD R FL + R  TL  AAR L V   TV RR+  LE ++ A +F RT  G+ LT  
Sbjct: 1   MEWDDLRFFLELARTRTLTEAARRLDVKHTTVARRIQRLELAVGAPVFTRTHAGHELTLR 60

Query: 61  GEAALLSVEKMERSALDLERQIQGLDDRLTGTVRVSTTDSLAIDFLIPSIARLHDKHPDV 120
           G   L+  + +E   L+++++       ++G VRV  T+   +  L   +A L  +HP++
Sbjct: 61  GRNLLVEAQAIEDLFLNMDQEETAPGPSVSGIVRVGCTEGYGVGVLPTDLAELRKQHPNL 120

Query: 121 RVQLDASTQILSLAKREADIAVRNTRPDNPDLIARRIARWPVGLFASQDYIDRHGVPEQG 180
           RV L    + + LA+ EADI +   RP+    +  ++  + + L+AS  Y+D H    + 
Sbjct: 121 RVDLIVQPRPILLARNEADIVITIDRPERGPYLITKLYDYTLRLYASPSYLDAHKPIRRL 180

Query: 181 SLFEGHDLVVYQPYLQSQKDITLV---AEPPGRGRIVAALSSSLLVRRSIAAGIGVGEIP 237
           S  + H  V Y       K + ++    +    G    ++ S + +   +A+G G+  +P
Sbjct: 181 SDLKDHHFVSYIEESGPAKGLPVIWNLVQSNNPGIRSTSIFSQMAI---VASGGGIAILP 237

Query: 238 VYTGERDGLVRLWPERTRPLPYDVWLVTHADLRHTARVRVV 278
            Y   +D                 W++   +L+  ARV+ V
Sbjct: 238 SYLVGQDEAFSPVLGSEVSFQRTYWVMMPTELKRIARVQAV 278