Pairwise Alignments

Query, 410 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 398 a.a., Permeases of the major facilitator superfamily from Variovorax sp. SCN45

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 97/385 (25%), Positives = 150/385 (38%), Gaps = 18/385 (4%)

Query: 9   RRSVWLPIFAGLCASLVSIGLARFAYTPLIPTLIQAQWFSANDVVYLGAANLVGYLIGAL 68
           RR  W    A +    V++GL RFA+TP++P ++            L + N +GY +GA+
Sbjct: 8   RRDAWRAALACMVTLAVAMGLGRFAFTPMLPIMLHEGKLELAGGGVLASLNYLGYFLGAV 67

Query: 69  IGRPIAQRTSNKTALRMMMVAVTLAFFACGFPLSVVWFFAWRLLSGIAGGAIMVLVAATV 128
               I  + S  T +R  +VA  +     G   S   +   R  +G+    + V  +   
Sbjct: 68  SCAAIGVKAS--TMVRGGLVATAVLLIGMGLLHSFTGWGVLRWAAGVMSAWVFVFASGWG 125

Query: 129 LPHVPAARRGLASGAIFLGIGLGIAGSGTLVPPLLNLGLQQTWFGLGLLALVLTGASWFA 188
           L  +         G I+ G G+GIA +G L   L   G +  W GLGLLA VL    W  
Sbjct: 126 LRRLAETNAPTLGGVIYTGPGIGIAMTGLLGGALGRWGSEAGWIGLGLLAFVLIAVIWRV 185

Query: 189 WPTGTLHEAAAPTGTSAPTPSG----------VYLLFAQYAFMAAGLVPAMVFLVDYVAR 238
           +  G    AAA +G      SG             L + Y     G +    FL   +AR
Sbjct: 186 FDDG--QSAAAKSGAPVAVASGAAATGADRNDAIWLVSLYGLAGFGYIITATFL-PVIAR 242

Query: 239 GLGDGAHIGAMIWVMYGLGAIVGPVTYGFLADKLGARLSIRVVLVVQAIAVGLLPFTGSF 298
                +      W ++GL  I G +           RL + V   +QA+ V L     + 
Sbjct: 243 QALPESSWPDYFWPLFGLAIIPGALIGARAPTHWDNRLLLAVAYALQALGVVLSVAWPTI 302

Query: 299 TALAVLAVVLGSFPPGIVPLALARVHELLPNHHQQHVAWSRATVSFATFQALSGFAYSAL 358
              A  +++LG     I   A+     L  N     + +  AT S+   Q + G  ++A 
Sbjct: 303 VGFAFGSLLLGMPFTAITLFAVREARRLRGNAAAGLIGY--ATASYGVGQ-IVGPLFAAP 359

Query: 359 FNSSGGQHALLFMIAAGAIVVALAL 383
                G   L  ++AA A+ +   L
Sbjct: 360 LAQRTGSFQLPLLVAAAALALGSVL 384