Pairwise Alignments

Query, 410 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 416 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 107/409 (26%), Positives = 165/409 (40%), Gaps = 28/409 (6%)

Query: 2   LDTHAPPRRSVWLPIFAGLCASLVSIGLARFAYTPLIPTLIQAQWFSANDVVYLGAANLV 61
           L + A P +      FA    + VS+G+ RF+Y  L+P +     +S      +  AN V
Sbjct: 13  LTSTAVPAQPALRLAFALSMGAAVSLGITRFSYGLLLPPMRADLGWSYALAGGMNTANAV 72

Query: 62  GYLIGALIGRPIAQRTSNKTALRMMMVAVTLAFFA-CGFPLSVVWFFAWRLLSGIAGGAI 120
           GYLIGALI  P+  R    T L ++   +   F A  GF  +       RLL+GIA   +
Sbjct: 73  GYLIGALI-TPVLMRRFGVTRLLLVGAVLASVFMAGSGFVTAAPALLLQRLLAGIASAWV 131

Query: 121 MVL--VAATVLPHVPAARRGLASGAIFLGIGLGIAGSGTLVPPLLNL------GLQQTWF 172
            V   + A  L    ++R GL  G  + G G GIA S  LVP +L        G    W+
Sbjct: 132 FVAGGLLAARLGEAGSSRGGLLLGIYYGGTGFGIALSALLVPQVLRAAADVPHGWAWAWW 191

Query: 173 GLGLLALVLTG-ASWF--AWPTGTLHEAAAPTGTSAPTPSGVYLLF----AQYAFMAAGL 225
            L + +   T   +W   A P      AA+PT T+   P      F    A YA    G 
Sbjct: 192 ALAIASAAATCLLAWAGRAMPDRPAAHAASPTATTTSAPPVALHRFGWALAGYALFGMGY 251

Query: 226 VPAMVFLVDYVARGLGDGAHIGAMIWVMYGLGAIVGPVTYGFLADKLGARLSIRVVLVVQ 285
           +  M F++  + R  G  A    + + + G+  +     +  L D+        ++  + 
Sbjct: 252 IGYMTFVI-ALLREQGASAGFITLFYALLGVACVASSRLWAGLLDRYRGGQPQALLNGLL 310

Query: 286 AIAVGLLPFTGSFTALAVLAVVLGSFPPGIVPLALARV-HELLPNHHQQHVAWSRATVSF 344
            +A  L   + S     V  V+ G     +V    A V H L P    Q +  S  T+ F
Sbjct: 311 GVATLLPVLSPSAPVALVSGVLFGGVFLSVVASTTALVRHNLPPACWAQGI--SMFTIVF 368

Query: 345 ATFQALSGFAYSALFNSSGGQHALLFMIAAGAIVVALALELGMIVLNRR 393
           A  Q +       + +  GG       +A G +  A+ L    ++ +R+
Sbjct: 369 AAGQIVGPTVTGWISDGPGG-------LARGLVASAITLWAAAVLASRQ 410