Pairwise Alignments

Query, 410 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 390 a.a., putative MFS superfamily transporter precursor from Pseudomonas putida KT2440

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 106/379 (27%), Positives = 156/379 (41%), Gaps = 27/379 (7%)

Query: 14  LPIFAGLCASLVSIGLARFAYTPLIPTLIQAQWFSANDVVYLGAANLVGYLIG---ALIG 70
           + + A   A ++++G+ RFA TP +P LI    F       + AAN +GY +G   A+  
Sbjct: 5   IQLLASAVALMMAMGIGRFALTPQLPQLIAEGQFDLTVAGLVAAANYLGYFVGAVDAMFA 64

Query: 71  RPIAQRTSNKTALRMMMVAVTLAFFAC-GFPLSVVW-FFAWRLLSGIAGGAIMVLVAATV 128
           R   Q          + V +TLA +A  GF     W     R  +G+A   ++V++ +  
Sbjct: 65  RSPGQVRRRLHGGLWLCVLLTLASWAANGF-----WGHLLLRFGTGVASAWVLVMITSLS 119

Query: 129 LPHVPAARRGLASGAIFLGIGLGIAGSG--TLVPPLLNLGLQQTWFGLGLLALVLTGASW 186
                A  R      +F G GLGIA +G   LV  +L LG    W    + ALV+  A  
Sbjct: 120 QQVATAHNRQRLGALVFAGPGLGIAVTGLLALVAHVLGLGSAALWLIYAVAALVMLLAV- 178

Query: 187 FAWPTGTLHEAAAPTGT---SAPTPS-GVYLLFAQYAFMAAGLVPAMVFLVDYVARGLGD 242
             W    L   AAPT +     PT + G   L   Y     G +    FL   +A     
Sbjct: 179 RPWLPRALQ--AAPTQSPVRQGPTRNVGTGRLGLVYGLYGMGYILPATFL-SQMANQQFR 235

Query: 243 GAHIGAMIWVMYGLGAIVGPVTYGFLADKLGARLSIRVVLVVQAIAVGLLP-FTGSFTAL 301
           G  +  + W  +GL A +G +      D    R S  +   +    +G+L    G    L
Sbjct: 236 GQWLADLFWPAFGLAAALGVLLVSVRRD---GRTSTWLTATLWLQGLGVLACLMGGGIGL 292

Query: 302 AVLAVVLGSFPPGIVPLALARVHELLPNHHQQHVAWSRATVSFATFQALSGFAYSALFNS 361
           A+   + G      + L + R  EL P   Q++      T  FA  Q LSG   +AL + 
Sbjct: 293 ALGVALCGGPFLACMQLVMQRSRELAPQATQRNA--GLLTACFALGQ-LSGPLLAALSSH 349

Query: 362 SGGQHALLFMIAAGAIVVA 380
             G      M+AAG +VVA
Sbjct: 350 YSGGLQPALMLAAGGLVVA 368