Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 314 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (297), Expect = 1e-31
 Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 13/304 (4%)

Query: 7   MVYPNFQSLS-LSLGSVFECANLLRGEPAYEFHLVSESGGAVMTSQGFSVNTT----PIR 61
           ++ P F ++  +S       AN  RGE  Y +H++S  GGAV+ S G SVN      P++
Sbjct: 8   LLMPGFSAIGFISALEPLRVANRFRGE-LYRWHVLSADGGAVLASNGMSVNADAALEPLK 66

Query: 62  PEGYDTLIVSGYLEFRLPEANLLELVKAASAQSRRVASLCMGIFVLAEAGLLEGKRTTTH 121
            +G   L+V+G+   +     L   ++    +   + ++  G  VLAEAGLL+G R T H
Sbjct: 67  -KGATLLVVAGFEPLQFATPALEHWLRRLDHEGVTLGAIDTGACVLAEAGLLDGHRLTLH 125

Query: 122 WIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGSDLARRIARK 181
           W    AF++ YP + + ++ LF +D    T AG +A +DL L ++    G +LA +++ +
Sbjct: 126 WEAIDAFKEAYPQLTVTQE-LFEIDRRRITCAGGTASIDLMLDLIAQAHGPELAIQVSEQ 184

Query: 182 LVIAQ---RRGSEQSQLSALLELDPKSDRVQLALAYARENLTHDLSVEALADVARLSPRQ 238
            V+ +   R+  ++ Q++    ++ K  ++   +    ++    LS  ALA+  +++ RQ
Sbjct: 185 FVLGRIRPRKDHQRMQIATRYGINNK--KLVQVIGEMEQHTEPPLSTLALAEAIKVTRRQ 242

Query: 239 FSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQAFLRAFG 298
             R+FR     TP+     LR+E AR ++  S   V  V+   GF       +++   F 
Sbjct: 243 LERLFRLHLNDTPSNFYLGLRLEKARQLLRQSDMSVLEVSIACGFESPSYFTRSYRARFA 302

Query: 299 QPPQ 302
           + P+
Sbjct: 303 KCPR 306