Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  161 bits (407), Expect = 2e-44
 Identities = 104/316 (32%), Positives = 169/316 (53%), Gaps = 12/316 (3%)

Query: 1   MHSVALMVYPNFQSLSLSLG-SVFECANLLRGEPAYEFHLVSESG---GAVMTSQGFSVN 56
           M +VA+ ++P+F  L ++    VF  AN  R  PA E + +   G   G +  S G +V 
Sbjct: 1   MKTVAMALFPDFLLLDMAGPLEVFSIAN--RYLPAAEHYRILTLGTEPGPLRASNGVAVQ 58

Query: 57  TTPI---RPEGYDTLIVSGYL-EFRLPEANLLELVKAASAQSRRVASLCMGIFVLAEAGL 112
           T  +     + YD L+V G    +      LL  +KAA+ ++RR  S+C G FVL  AGL
Sbjct: 59  TDLLLDQAQDAYDLLLVPGGPGAYNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGL 118

Query: 113 LEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGS 172
           L+  R TTHW +     K +P   +E D++++ DG + T  G++AG+DLAL++V  D G 
Sbjct: 119 LDNHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGK 178

Query: 173 DLARRIARKLVIAQRRGSEQSQLSAL-LELDPKSDRVQLALAYARENLTHDLSVEALADV 231
            +A  +A+ L++  +R   Q+Q S +   + P+   +     +  E+L    ++E++A +
Sbjct: 179 QVAVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAAL 238

Query: 232 ARLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQ 291
           A +S R F+R+F +E   TP   ++  R++ AR ++ET+  P++ VA   GFG    MR 
Sbjct: 239 AGMSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRF 298

Query: 292 AFLRAFG-QPPQVMQQ 306
            F    G  P Q  QQ
Sbjct: 299 LFSEKLGLNPTQYRQQ 314