Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  194 bits (493), Expect = 2e-54
 Identities = 116/312 (37%), Positives = 176/312 (56%), Gaps = 9/312 (2%)

Query: 4   VALMVYPNFQSLSLSLG-SVFECANLL---RGEPA-YEFHLVSESGGAVMTSQGFSVNTT 58
           V ++ + N Q L ++    VF   N L   RGEP  Y   +++     VMTS G ++   
Sbjct: 5   VHVLAFDNAQVLDVTGPLQVFASTNDLARQRGEPLPYAVSVIAAQSEPVMTSAGLALVAE 64

Query: 59  PIRPEGY--DTLIVSGY--LEFRLPEANLLELVKAASAQSRRVASLCMGIFVLAEAGLLE 114
           P+       DTL+++G   +     +  L++ V+  +  +RR+ S+C G F+LA +G+L+
Sbjct: 65  PLPAADAPCDTLVIAGGWGVYGAAEDPALVDWVREKAKHTRRMTSVCTGAFLLAASGMLD 124

Query: 115 GKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGSDL 174
           G R  THW       +++P + +E + +FI  G VWT AG++AG+DL LA+VE DLG  +
Sbjct: 125 GCRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLALVEEDLGRAI 184

Query: 175 ARRIARKLVIAQRRGSEQSQLSALLELDPKSDRVQLALAYARENLTHDLSVEALADVARL 234
           A  +AR LV+  +R   QSQ S  L L     R     A+  ENLT DL++  LA  A +
Sbjct: 185 ALEVARHLVVFLKRPGGQSQFSVTLSLQKDDSRFAELHAWMAENLTLDLNIPTLAAQAGM 244

Query: 235 SPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQAFL 294
           S R F R +R ETGQTPA+A+E +RVE AR  +  S   ++ +A + GFG  E +R++FL
Sbjct: 245 SERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIKRIAVQCGFGCEETLRRSFL 304

Query: 295 RAFGQPPQVMQQ 306
           RA    PQ  ++
Sbjct: 305 RALSVTPQAYRE 316