Pairwise Alignments

Query, 292 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 228 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 10/189 (5%)

Query: 108 ISESDLLRRYGVGKSVLRRCLLRLSDEGVMQRKHGHGW--QFLPTLNSPQTRFESYRFRM 165
           ++E  +  + G+ ++ LR  + RL  E  ++R+       + LP     +        R 
Sbjct: 45  VTERQIALQLGISRTPLREAVRRLEGERFLERQRNGALVVRALPI----EEYMHILNVRR 100

Query: 166 LLEPAGLLEPTFKINPEQFRRCRERQMELLEGKVD--GQRFIEYNAEFHELLAAASGNGY 223
           L+E         ++   +    + R  E L+   D     F   + + H L+AAA GN  
Sbjct: 101 LVEGEAARLAAGRVAAAELELLKSRIGEALQLPEDVVTPEFAASDRDLHALIAAACGNPV 160

Query: 224 ILQAIQQQNRLRRLTEFHTVNNQERVKVSCCEHLAILDALEQGDNEWASTLLHRHLDVAS 283
           + Q I        +  F  +   +R K  C EHL I+DAL  GD + A   +H H+D   
Sbjct: 161 LQQVIGDLRMRTAMFRFGRL--PQRRKTVCEEHLEIIDALMAGDAQRAQKAMHHHVDQVR 218

Query: 284 KLRVARNKG 292
            + ++R  G
Sbjct: 219 LMILSRLGG 227



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 15/46 (32%), Positives = 30/46 (65%)

Query: 15 ILAAIASGDLQPGLHLKEVELAQRLGVSRSPIRSALAYLAEQKAIE 60
          ++  + SG+L P   + E ++A +LG+SR+P+R A+  L  ++ +E
Sbjct: 30 MMGMLLSGELAPNEVVTERQIALQLGISRTPLREAVRRLEGERFLE 75