Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  218 bits (554), Expect = 4e-61
 Identities = 136/418 (32%), Positives = 207/418 (49%), Gaps = 35/418 (8%)

Query: 29  FIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQGFILNLKSGFTEGTVGFGVDVVGMLG 88
           F++ +  +++ +NYY NRD R D      +EW QGF+   +SG+T+GTVGFG+D   MLG
Sbjct: 33  FVEGAHLNINTRNYYMNRD-RRDIHTDDSKEWGQGFLGIFESGYTQGTVGFGLDAHAMLG 91

Query: 89  LKLDSSPDRSGSGLL--SRDNDATPGKPSYSKRAHDEYSKYGVTGKVRFAQSELRSGYLL 146
           LKLD      GS +L     N   PG           +S  G T K+R   +EL++G L 
Sbjct: 92  LKLDGGGGTDGSSILPYGSGNGKAPG----------SFSTAGGTLKMRAFDTELKAGDLF 141

Query: 147 PDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQRESTEYEDMGLTSQSGA 206
            + P +    +R+ PQTFRG  +T+  + G    GGQ   TK    + +  +G  +  GA
Sbjct: 142 LNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTKLYNQSGHRRIG--TSYGA 199

Query: 207 YKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQHFVGLKNSFALGGG-TLKTDIR 265
                 S    +AG  +    G+T + + A+L+D++ Q++  L  ++ +    +L   + 
Sbjct: 200 LPEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYYYDLDYTYVVNEMISLNPGLH 259

Query: 266 YFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQYGDTPFTYV-DGTNTYLFSE 324
           Y+    +G  L G +DN   S         HS+   YQ   G+TPF Y+  G + YL + 
Sbjct: 260 YYHTQDTGQSLLGDIDNNTYSLHFTVDVGHHSVTAAYQRVNGNTPFDYIAQGDSVYLDNS 319

Query: 325 YQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGD------QAQVKGFAG----- 373
            Q S+F+  NER W  +Y ++F  LG+PGLT +  +  G         Q +G++      
Sbjct: 320 QQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYISGKTDLTKVDPQSRGYSAWYSAD 379

Query: 374 --EGREWERDIDLGYVFQSGTLK--GVSLRWRNGLSKANYL---RDMNENRVIVGYTV 424
             + + WERDIDL YV Q G  K   V L+W        Y    RD++E RVIV Y +
Sbjct: 380 GKDAKHWERDIDLKYVVQGGKAKDLAVRLQWATNRGSNGYSAVDRDVDEYRVIVDYPI 437