Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  221 bits (562), Expect = 4e-62
 Identities = 144/422 (34%), Positives = 210/422 (49%), Gaps = 37/422 (8%)

Query: 29  FIKDSKADLDLKNYYFNRDYRED----AGQSKREEWAQGFILNLKSGFTEGTVGFGVDVV 84
           FI+ S  ++  +N+YFNRD R+      G    E WAQG I   +SGFT+GTVGFG+D  
Sbjct: 30  FIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGLIGRFESGFTQGTVGFGLDAF 89

Query: 85  GMLGLKLDSSPDRSGS----GLLSRDNDATPGKPSYSKRAHDEYSKYGVTGKVRFAQSEL 140
            M+G+KLDS   RSG     G+L  D+         S    D YSK G   K+R   + +
Sbjct: 90  AMVGVKLDSGTGRSGGKGSFGVLPVDS---------SNHPEDNYSKVGGAAKLRVLDTVI 140

Query: 141 RSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQRESTEYEDMGL 200
           ++G + P  P +    SR+ P++FRG    +T + GL+L GG++    Q   +   D G 
Sbjct: 141 KAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMSQPAQSGM-DKGF 199

Query: 201 TSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQHFVGLKNSFALGGG-T 259
            +    Y     S    + GGDY +   ++ S + ++L+D + Q++ G    + L    +
Sbjct: 200 AT---FYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAWDQYYFGSAARYPLNDEVS 256

Query: 260 LKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQYGDTPFTYV-DGTN 318
           L  D  Y+ A   G    G  DN   S R       HSL   +Q   GD  F Y+    +
Sbjct: 257 LFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDDDFDYLRQSDS 316

Query: 319 TYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGDQAQV---------K 369
            +L +  Q S+F+   ER W  RYD D  A G+PGL+F TR+ KG  A           +
Sbjct: 317 IFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGADYSNANAVYMRR 376

Query: 370 GFAG----EGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKAN-YLRDMNENRVIVGYTV 424
             AG    + R WERDI+  YV Q+G LK +SLR R    +++ +  D+ E RVIV Y +
Sbjct: 377 DGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESDLEEVRVIVEYPI 436

Query: 425 AL 426
           A+
Sbjct: 437 AV 438