Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  328 bits (842), Expect = 2e-94
 Identities = 190/453 (41%), Positives = 260/453 (57%), Gaps = 49/453 (10%)

Query: 5   TLNLILKGVGLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYRED-AGQSKREEWAQG 63
           TLN++    G + G  L   A ADF+ DSKA+L ++N+YFN D R+  A  SK EEW Q 
Sbjct: 4   TLNVLSVLTGSL-GVALSPLASADFLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQA 62

Query: 64  FILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRS-GSGLLSRDNDATPGKPSYSKRAHD 122
           FILN +SGFT+GTVGFG+D +GMLG+ LDS   R  GS ++  D+           +A D
Sbjct: 63  FILNYQSGFTDGTVGFGLDAIGMLGITLDSGAGRHVGSSMIPNDDG----------KATD 112

Query: 123 EYSKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGG 182
            +++ G T K RFA+SELR GYL P+LP L  N  RL PQ+F G Q+TS DI  L LIGG
Sbjct: 113 NWARGGATAKARFAKSELRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGG 172

Query: 183 QIDQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIY 242
           Q+  T  R S++   + +         T +S+ F +AG DY++T  + L Y++A LED Y
Sbjct: 173 QLQHTTGRGSSDRSGLAVAG------GTQESNTFNYAGADYQVTKDLMLQYYYANLEDYY 226

Query: 243 QQHFVGLKNSFALGG-GTLKTDIRYFDADKSG-----AGLA-------------GKVDNR 283
           QQHF GL +   LG  G+LKTD+RYF     G     AG A             G++DN 
Sbjct: 227 QQHFAGLIHVLPLGDYGSLKTDLRYFKTTSDGKNSSVAGRAEGYKLGGYTKNGTGEIDNN 286

Query: 284 ALSTRAMFSYKGHSLGGGYQEQYGDTPFTYVD----------GTNTYLFSEYQLSNFSQT 333
             S   ++S   H++  GYQ+   D+ F  ++          G++ YL+++  +  F Q 
Sbjct: 287 TWSAAFIYSLGPHAITAGYQQVSDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQA 346

Query: 334 NERVWHARYDFDFAALGVPGLTFSTRWAKGDQAQVKGFAGEGREWERDIDLGYVFQSGTL 393
            ER   A+Y +DFA+LGVPGL  S  + KGD   +     +  EWERDI L YV QSGT 
Sbjct: 347 GERTAFAQYAYDFASLGVPGLKASVMYLKGDHI-LTASGNDASEWERDISLDYVVQSGTF 405

Query: 394 KGVSLRWRNGLSKANYLRDMNENRVIVGYTVAL 426
           K V   WRNG+S++   RD ++NRV V Y++ L
Sbjct: 406 KNVGFGWRNGVSRSEVARDQDQNRVFVNYSIPL 438