Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  280 bits (717), Expect = 5e-80
 Identities = 164/427 (38%), Positives = 241/427 (56%), Gaps = 21/427 (4%)

Query: 5   TLNLILKGVGLMSG-GLLCAPAQADFIKDSKADLDLKNYYFNRDYRED-AGQSKREEWAQ 62
           TL   +  V L  G GL     +  F++D+K  L L+NYYFNRD+R+  A + K EEWAQ
Sbjct: 7   TLARSVLAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQ 66

Query: 63  GFILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHD 122
           GFI    SG+T G +GFG+D + + G+KLDS    SGS LL   +D          RA D
Sbjct: 67  GFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDG---------RAAD 117

Query: 123 EYSKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGG 182
           +Y + G+  K+R + +EL+ G LLPD+P L+ +  RL PQTFRG  + S +I GL+L  G
Sbjct: 118 DYGRAGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAG 177

Query: 183 QIDQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTL--SYHFAQLED 240
           Q  +   R S++ +D+   +  G       SD F +AG +Y+     TL  ++H +QLED
Sbjct: 178 QYREVSLRHSSDMQDLSAWAAPG-----VTSDGFNYAGAEYRFNQQRTLIGAWH-SQLED 231

Query: 241 IYQQHFVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGG 300
           IYQQ +  L +S  +G  TL  ++ YF     G    G + +R        S+ GH+L  
Sbjct: 232 IYQQSYFNLLHSQRVGEWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYL 291

Query: 301 GYQEQYGDTPFTYVDGTN-TYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTR 359
           G Q+  GD+ +  V G++   L ++    NFS  +ER W  RYD++FAALGVPGL    R
Sbjct: 292 GLQKVSGDSQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVR 351

Query: 360 WAKGDQAQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYLRDMNENRVI 419
           +  G+ A        G+EWERD ++ Y FQSG LK +++R  N  ++ ++  D+++ R+I
Sbjct: 352 YGHGENATTAA-GSNGKEWERDAEVNYTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLI 410

Query: 420 VGYTVAL 426
           V Y + L
Sbjct: 411 VSYPLTL 417