Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  390 bits (1003), Expect = e-113
 Identities = 204/431 (47%), Positives = 278/431 (64%), Gaps = 27/431 (6%)

Query: 6   LNLILKGVGLMSGGLLCAP-AQADFIKDSKADLDLKNYYFNRDYRED-AGQSKREEWAQG 63
           +++  K     S  LL AP A A F++D K  L+L+N+Y+NRD+R D A QSKR+EWAQG
Sbjct: 1   MSIAFKKTLACSATLLVAPYASAAFVEDFKGSLELRNFYYNRDFRNDGATQSKRDEWAQG 60

Query: 64  FILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDE 123
           FILNL+SGFTEG VGFG+D +G+LG+KLDSSPDR+GSGLL+ D+D         ++  DE
Sbjct: 61  FILNLQSGFTEGPVGFGIDAMGLLGVKLDSSPDRTGSGLLAYDSD---------RQVEDE 111

Query: 124 YSKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQ 183
           Y K+  T K R  ++ELR G + P +P L  N SRL PQ FRG  +T  DI  L +   +
Sbjct: 112 YGKFVATAKARMGKTELRIGGVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTATR 171

Query: 184 IDQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQ 243
           I+  KQR ST++E +  T  +       ++D + +   D+K    MT S H A+LED+Y+
Sbjct: 172 INAVKQRNSTDFESLTATGYA-----PVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYK 226

Query: 244 QHFVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQ 303
            +F G+K    L  G +  D+R FDA ++G+   G+VDNR LS+   +S KGH++GGGYQ
Sbjct: 227 SYFAGIKVIKPLWEGNVIADVRVFDASETGSKKLGEVDNRTLSSYFAYSIKGHTIGGGYQ 286

Query: 304 EQYGDTPFTYVDGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKG 363
           + +GDT F +V+GT+TYLF E  +S F+   ERVW ARYDFDFAALGVPGL F+TR+ KG
Sbjct: 287 KAWGDTSFAFVNGTDTYLFGESLVSTFTAPEERVWFARYDFDFAALGVPGLLFTTRYMKG 346

Query: 364 DQ-----------AQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYLRD 412
           D            A ++    +G+EWER  D+ YV QSG  KGVS +WRN  +++ Y   
Sbjct: 347 DDVNPDLLTSRQAASLRLNGEDGKEWERVTDISYVIQSGPAKGVSFQWRNSTNRSTYADS 406

Query: 413 MNENRVIVGYT 423
            NENR+I+ YT
Sbjct: 407 ANENRLIMRYT 417