Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  419 bits (1077), Expect = e-122
 Identities = 223/430 (51%), Positives = 285/430 (66%), Gaps = 23/430 (5%)

Query: 8   LILKGVGLMSGGLLCA--PAQADFIKDSKADLDLKNYYFNRDYRED-AGQSKREEWAQGF 64
           +I +   L+   L CA   AQA FI D    L+L+N+YF+RD+  D A QS+R EWAQGF
Sbjct: 3   VIFRRASLVLSALYCACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGF 62

Query: 65  ILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEY 124
           +L L+SG+T+G VGFG+D  GMLGLKLDSSPDRSGSGLL R +D         KRA D+Y
Sbjct: 63  MLRLQSGYTDGVVGFGLDAAGMLGLKLDSSPDRSGSGLLPRGSD---------KRAADDY 113

Query: 125 SKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQI 184
           +K   T K R AQSEL++G L P LP L  N+SRLFPQ F G Q+ S D+        Q+
Sbjct: 114 AKAVATFKARLAQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQV 173

Query: 185 DQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQ 244
           D TK R+ST+YED+   +Q GAY +T  SDR R+AG DY+    +TLS H + LED++++
Sbjct: 174 DATKLRDSTDYEDLTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRR 233

Query: 245 HFVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQE 304
            F G K    LG G + T+ R+F+A + G  L G VDN+ LST   +S +GH+  GGYQ+
Sbjct: 234 DFAGFKFKTRLGPGDVFTEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQK 293

Query: 305 QYGDTPFTYVDGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGD 364
             GDT + YV GT+TYLFSE Q+S F+  NER W  RYD++FAA+G+PGLTF+ R+ KGD
Sbjct: 294 VRGDTAYAYVGGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGD 353

Query: 365 Q------AQVKGFA-----GEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYLRDM 413
           Q      A VKG A     GEGREWER  D+ YV QSG L+ VSLRWRN   ++N+    
Sbjct: 354 QVDPQRIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNASMRSNFADAA 413

Query: 414 NENRVIVGYT 423
           +ENRVIVGYT
Sbjct: 414 DENRVIVGYT 423